RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 DMRTC1Q5HYR2 192 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 FAM201AQ5SY85 155 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF705AQ6ZN79 300 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 CAMK2N1Q7Z7J9 78 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 SLC35F2Q8IXU6 374 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 VKORC1L1Q8N0U8 176 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 OR4B1Q8NGF8 309 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 MS4A6EQ96DS6 147 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 ZC2HC1AQ96GY0 325 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 GPR21Q99679 349 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 EMC6Q9BV81 110 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 RTL8AQ9BWD3 113 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF471Q9BX82 626 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TMEM191AQ9H0A3 160 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 HES4Q9HCC6 221 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 ASF1BQ9NVP2 202 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 AIG1Q9NVV5 245 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 NDUFB11Q9NX14 153 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 BET1LQ9NYM9 111 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 GBF1Q92538 1859 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 DEPDC5O75140 1603 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 FANCMQ8IYD8 2048 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 DOCK6Q96HP0 2047 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TRBV6-7A0A0A0MS04 114 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TRBV7-7A0A0K0K1E9 115 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TEX50A0A1B0GTY4 177 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TMEM250H0YL14 139 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 H7C1C5 153 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 LYRM1O43325 122 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 NUPR1O60356 82 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 C1QAP02745 245 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 CECR9P0C854 216 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 INSL3P51460 131 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 PLGLB1Q02325 96 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 SP6Q3SY56 376 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 HBMQ6B0K9 141 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 OR2T2Q6IF00 324 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 LYPD2Q6UXB3 125 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TCF23Q7RTU1 214 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 SPATA12Q7Z6I5 190 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 CMC1Q7Z7K0 106 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TMEM179BQ7Z7N9 219 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TGIF2LYQ8IUE0 185 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TWIST2Q8WVJ9 160 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 LSM10Q969L4 123 aaKnown RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 IGF2BP2-AS1Q96M15 143 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 C20orf78Q9BR46 151 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 MED28Q9H204 178 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 RPP21Q9H633 154 aaKnown RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TMEM9BQ9NQ34 198 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 DAZ1Q9NQZ3 744 aaKnown RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 PARP11Q9NR21 331 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 KCNIP2Q9NS61 270 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF586Q9NXT0 402 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 LRP6O75581 1613 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 MIA3Q5JRA6 1907 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 A0A087X0T9 212 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 TRAV19A0A0A6YYK7 116 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 TRAV5A0A0B4J249 113 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 IGHV3-64DA0A0J9YX35 117 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 OOSP1A8MZH6 123 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 K7EPK0 472 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 CCL21O00585 134 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 ATP5LO75964 103 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 CHTF8P0CG12 524 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 IGHV3-43DP0DP04 118 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 PFN2P35080 140 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 RPA3P35244 121 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-212ENST00000557538 CCL23P55773 120 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 H2BFSP57053 126 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 PRR3P79522 188 aaKnown RBP1.11□□□□□ -2.23
HIF1A-212ENST00000557538 RRN3P1Q2M238 152 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 PAGE3Q5JUK9 113 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 C2orf91Q6ZV80 131 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 DAZ4Q86SG3 579 aaKnown RBP1.11□□□□□ -2.23
HIF1A-212ENST00000557538 OR2M3Q8NG83 312 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 C18orf32Q8TCD1 76 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 PRSS27Q9BQR3 290 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 ATG5Q9H1Y0 275 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 OR2D2Q9H210 308 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF442Q9H7R0 627 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 OTORQ9NRC9 128 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 CISHQ9NSE2 258 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 LSM2Q9Y333 95 aaKnown RBP1.11□□□□□ -2.23
HIF1A-212ENST00000557538 LSM5Q9Y4Y9 91 aaKnown RBP1.11□□□□□ -2.23
HIF1A-212ENST00000557538 CHCHD2Q9Y6H1 151 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-212ENST00000557538 V9GY05 133 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 CACNA1GO43497 2377 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 SCN8AQ9UQD0 1980 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 NUP98P52948 1817 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 CHD3Q12873 2000 aaKnown RBP1.11□□□□□ -2.23
HIF1A-212ENST00000557538 TRBV19A0A075B6N1 114 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 A0A1W2PPM0 123 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 C7orf71A4D174 169 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 M0R2Z0 102 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 FFAR1O14842 300 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 AGPAT2O15120 278 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 NDUFB6O95139 128 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 CA2P00918 260 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 BCL2P10415 239 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms