RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ARPC4P59998 168 aa6.09□□□□□ -1.43
NEDD1-211ENST00000557454 MRPL23Q16540 153 aaKnown RBP6.09□□□□□ -1.43
NEDD1-211ENST00000557454 OR51G1Q8NGK1 321 aa6.09□□□□□ -1.43
NEDD1-211ENST00000557454 ARGLU1Q9NWB6 273 aaPredicted RBP6.09□□□□□ -1.43
NEDD1-211ENST00000557454 H7BYZ3 331 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 UCHL1P09936 223 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 HSPA13P48723 471 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 ZNF415Q09FC8 603 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 GAMTQ14353 236 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 CT83Q5H943 113 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 CCDC28AQ8IWP9 274 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 OR52E5Q8NH55 327 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 CENPNQ96H22 339 aaPredicted RBP6.08□□□□□ -1.44
NEDD1-211ENST00000557454 TMEM80Q96HE8 168 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 PBDC1Q9BVG4 233 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 DAPK2Q9UIK4 370 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 AP4S1Q9Y587 144 aa6.08□□□□□ -1.44
NEDD1-211ENST00000557454 IRGMA1A4Y4 181 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 ERICH4A6NGS2 130 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 PRAF2O60831 178 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 TOMM40O96008 361 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 IGHV3-53P01767 116 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 RD3LP0DJH9 198 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 FCGR1AP12314 374 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 GYPEP15421 78 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 RPL5P46777 297 aaKnown RBP6.07□□□□□ -1.44
NEDD1-211ENST00000557454 WNT4P56705 351 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 RHOBP62745 196 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 SUPT4H1P63272 117 aaKnown RBP6.07□□□□□ -1.44
NEDD1-211ENST00000557454 TDRG1Q3Y452 100 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 CDNFQ49AH0 187 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 MORN5Q5VZ52 161 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 IGFL4Q6B9Z1 124 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 PRSS54Q6PEW0 395 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 C9orf47Q6ZRZ4 202 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 SLC35G3Q8N808 338 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 HSD17B11Q8NBQ5 300 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 IL22RA2Q969J5 263 aa6.07□□□□□ -1.44
NEDD1-211ENST00000557454 IGHV3-38A0A0C4DH36 116 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 A0A0J9YXV3 536 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 SSX5O60225 188 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 PGLYRP1O75594 196 aaPredicted RBP6.06□□□□□ -1.44
NEDD1-211ENST00000557454 PSG1P11464 419 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 SRIP30626 198 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 TNFSF8P32971 234 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 CRYBA4P53673 196 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 SUB1P53999 127 aaKnown RBP eCLIP6.06□□□□□ -1.44
NEDD1-211ENST00000557454 OR10A3P58181 314 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 HIST1H1AQ02539 215 aaPredicted RBP6.06□□□□□ -1.44
NEDD1-211ENST00000557454 DAZ2Q13117 558 aaKnown RBP6.06□□□□□ -1.44
NEDD1-211ENST00000557454 IZUMO4Q1ZYL8 232 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 SAMD13Q5VXD3 122 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 H2BFWTQ7Z2G1 175 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 MS4A15Q8N5U1 240 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 RNF182Q8N6D2 247 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 SEC22AQ96IW7 307 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 C8orf49Q96NF6 230 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 TM2D2Q9BX73 214 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 PPP1R14DQ9NXH3 145 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 PRO0255Q9UI72 69 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 RPH3ALQ9UNE2 315 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 FUT9Q9Y231 359 aa6.06□□□□□ -1.44
NEDD1-211ENST00000557454 TRGV1A0A0A0MS02 117 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 EFCAB10A6NFE3 127 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 INS-IGF2F8WCM5 200 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 K7EQD1 137 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 MYL12BO14950 172 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 NXPH3O95157 252 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 OR5AC1P0C628 307 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 MEOX2P50222 304 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 KRTAP10-8P60410 259 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 LINC01556Q5JQF7 62 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 OR8G2PQ6IF36 304 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 THAP8Q8NA92 274 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 BAALCQ8WXS3 180 aa6.05□□□□□ -1.44
NEDD1-211ENST00000557454 LOC100130705A0A1B0GUX0 176 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 C9JCJ5 164 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 E5RGE8 158 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 IGKV1-39P01597 117 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 IGKV1D-39P04432 117 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 PI3P19957 117 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 PSMB9P28065 219 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 GNG2P59768 71 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 RPS25P62851 125 aaKnown RBP6.04□□□□□ -1.44
NEDD1-211ENST00000557454 TOR2AQ5JU69 321 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 C1orf194Q5T5A4 169 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 SPARTQ8N0X7 666 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 OR8I2Q8N0Y5 310 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 ZNF738Q8NE65 137 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 SLC24A4Q8NFF2 622 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 MRGPRFQ96AM1 343 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 ATG5Q9H1Y0 275 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 HHLA3Q9XRX5 114 aa6.04□□□□□ -1.44
NEDD1-211ENST00000557454 TRAV8-2A0A0B4J237 113 aa6.03□□□□□ -1.44
NEDD1-211ENST00000557454 METTL21EPA6NDL7 271 aa6.03□□□□□ -1.44
NEDD1-211ENST00000557454 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
NEDD1-211ENST00000557454 IGHV3-30P01768 117 aa6.03□□□□□ -1.44
NEDD1-211ENST00000557454 IGHV3-33P01772 117 aa6.03□□□□□ -1.44
NEDD1-211ENST00000557454 IGHV3-30-3P0DP02 117 aa6.03□□□□□ -1.44
NEDD1-211ENST00000557454 IGHV3-30-5P0DP03 117 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms