RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SS18Q15532 418 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 DPRXA6NFQ7 191 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 RNF223E7ERA6 249 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 H0YJW9 148 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 HBDP02042 147 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 PIP4P1Q86T03 277 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 PTPRQQ9UMZ3 2332 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 GAS1P54826 345 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 IL17RELQ6ZVW7 336 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 OR2K2Q8NGT1 345 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 PSG1P11464 419 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 SRSF2Q01130 221 aaKnown RBP6.87□□□□□ -1.31
CHD8-213ENST00000557364 Q0VFX4 171 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 FOXC2Q99958 501 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 IGHV2-70DA0A0C4DH43 119 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 CHCHD1Q96BP2 118 aaKnown RBP6.87□□□□□ -1.31
CHD8-213ENST00000557364 SPOCK3Q9BQ16 436 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 LAMTOR2Q9Y2Q5 125 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 SIGLEC9Q9Y336 463 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 ATRXP46100 2492 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 TRGV1A0A0A0MS02 117 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 GAFA1Q96PS6 74 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 JPT2Q9H910 190 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 H3BUA1 57 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 C1orf194Q5T5A4 169 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 ZNF562Q6V9R5 426 aa6.87□□□□□ -1.31
CHD8-213ENST00000557364 SLC25A39Q9BZJ4 359 aaPredicted RBP6.87□□□□□ -1.31
CHD8-213ENST00000557364 VCYO14598 125 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 DPM2O94777 84 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 LYZL4Q96KX0 146 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 TMEM238C9JI98 176 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 RASL10AQ92737 203 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 PLXNA2O75051 1894 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 GPR179Q6PRD1 2367 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 TMEM219Q86XT9 240 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 E7EQL1 145 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 RAMP3O60896 148 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 C1QCP02747 245 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 ZNF474Q6S9Z5 364 aaPredicted RBP6.86□□□□□ -1.31
CHD8-213ENST00000557364 PLEKHB2Q96CS7 222 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 WDR83OSQ9Y284 106 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 SCO2A0A1W2PP80 73 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 NAPSAO96009 420 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 CST9LQ9H4G1 147 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 ID3Q02535 119 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 ERCC8Q13216 396 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 MUC21Q5SSG8 566 aa6.86□□□□□ -1.31
CHD8-213ENST00000557364 TBX6O95947 436 aaPredicted RBP6.85□□□□□ -1.31
CHD8-213ENST00000557364 LAGE3Q14657 143 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 C1orf122Q6ZSJ8 110 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 FOXL2NBQ6ZUU3 175 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 ZCCHC24Q8N2G6 241 aaKnown RBP6.85□□□□□ -1.31
CHD8-213ENST00000557364 C11orf44Q8N8P7 122 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 TSKUQ8WUA8 353 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 TMEM158Q8WZ71 300 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 FGF16O43320 207 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 FAM110DQ8TAY7 271 aaPredicted RBP6.85□□□□□ -1.31
CHD8-213ENST00000557364 GNB1LQ9BYB4 327 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 IGKV1-9A0A0C4DH69 117 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 ELANEP08246 267 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 ACTL10Q5JWF8 245 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 SRRM4A7MD48 611 aaKnown RBP6.85□□□□□ -1.31
CHD8-213ENST00000557364 GGTLC3B5MD39 225 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 TDGF1P3P51864 188 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 B3GALT5-AS1P59052 145 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 GLMPQ8WWB7 406 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 EDA2RQ9HAV5 297 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 ACACBO00763 2458 aa6.85□□□□□ -1.31
CHD8-213ENST00000557364 DAD1P61803 113 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 CR1LQ2VPA4 569 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 CD55P08174 381 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 CBLN1P23435 193 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 FOXL1Q12952 345 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 TEX43Q6ZNM6 134 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 LINC00469Q8N7U9 141 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 PRDM13Q9H4Q3 707 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 TSPAN13O95857 204 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 MST1P26927 711 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 C10orf126Q8N4M7 172 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 BRD3OSQ6XYD6 125 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 COQ2Q96H96 371 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 RHPN1-AS1Q9BWJ2 59 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 RPL35AP18077 110 aaKnown RBP6.84□□□□□ -1.31
CHD8-213ENST00000557364 CD24P25063 80 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 LY96Q9Y6Y9 160 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.31
CHD8-213ENST00000557364 GRIFINA4D1Z8 144 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 MLNRO43193 412 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 LYPD3O95274 346 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 OTX1P32242 354 aaPredicted RBP6.84□□□□□ -1.31
CHD8-213ENST00000557364 C18orf15Q96N68 181 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 REG4Q9BYZ8 158 aa6.84□□□□□ -1.31
CHD8-213ENST00000557364 TSSC4Q9Y5U2 329 aaPredicted RBP6.84□□□□□ -1.32
CHD8-213ENST00000557364 MALRD1Q5VYJ5 2156 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 ZNF98A6NK75 572 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 C11orf68Q9H3H3 251 aaKnown RBP6.83□□□□□ -1.32
CHD8-213ENST00000557364 J3QRE1 110 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 WISP1O95388 367 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 CD177Q8N6Q3 437 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 IGKV1D-13A0A0B4J2D9 117 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms