RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	EBLN2	Q6P2I7	272 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	OR4B1	Q8NGF8	309 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	OR4X1	Q8NH49	305 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	APH1B	Q8WW43	257 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	FAM3D	Q96BQ1	224 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	TMEM80	Q96HE8	168 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	PLGRKT	Q9HBL7	147 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	CCL28	Q9NRJ3	127 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	KLK11	Q9UBX7	282 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076		A0A096LPF7	62 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076		A0A0J9YY99	117 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	PNMA8C	A0A1B0GUJ8	204 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	LOC100130705	A0A1B0GUX0	176 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	EFCAB10	A6NFE3	127 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	GYG2	O15488	501 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	TNFSF12	O43508	249 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	SCGB2A1	O75556	95 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	ADAP1	O75689	374 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	KRAS	P01116	189 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	ETV6	P41212	452 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	RPL5	P46777	297 aa	Known RBP	3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	RORC	P51449	518 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	WNT4	P56705	351 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	DEFB1	P60022	68 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	YPEL3	P61236	119 aa	Predicted RBP	3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	CATR1	Q13166	79 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	INSL4	Q14641	139 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	HSD17B12	Q53GQ0	312 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	FAM78B	Q5VT40	261 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	PQLC2	Q6ZP29	291 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	ZNF493	Q6ZR52	646 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	GPR141	Q7Z602	305 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	LINC00612	Q8N6U2	182 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	LGALS14	Q8TCE9	139 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076		Q8WTZ3	238 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	TMED6	Q8WW62	240 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	PINX1	Q96BK5	328 aa	Known RBP	3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	LINC00052	Q96N35	136 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	TSC22D3	Q99576	134 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	GFI1	Q99684	422 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076	NSG2	Q9Y328	171 aa		3.13	□□□□□ -1.91
SCFD1-223	ENST00000557076		A0A0J9YX75	114 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	METTL21EP	A6NDL7	271 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	INS-IGF2	F8WCM5	200 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	EI24	O14681	340 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	RS1	O15537	224 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	CRX	O43186	299 aa	Predicted RBP	3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	NXPH4	O95158	308 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	F2R	P25116	425 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	FCGR2C	P31995	323 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	SNCA	P37840	140 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	HSPA13	P48723	471 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	PSMB3	P49720	205 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	SUB1	P53999	127 aa	Known RBP eCLIP	3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	TAS2R60	P59551	318 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	HSPE1	P61604	102 aa	Known RBP	3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	CDNF	Q49AH0	187 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	DNAL1	Q4LDG9	190 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	PAPPA-AS1	Q5QFB9	102 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	HACD4	Q5VWC8	232 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	AMTN	Q6UX39	209 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	SIGLEC15	Q6ZMC9	328 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	TMEM256	Q8N2U0	113 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076		Q8N814	137 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	NEXN-AS1	Q8NBZ9	246 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	SECTM1	Q8WVN6	248 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	C16orf74	Q96GX8	76 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	LINC01587	Q99440	93 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	NOP10	Q9NPE3	64 aa	Known RBP	3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	ARGLU1	Q9NWB6	273 aa	Predicted RBP	3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	DAPK2	Q9UIK4	370 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	ANXA10	Q9UJ72	324 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	AK6	Q9Y3D8	172 aa	Known RBP	3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076	MUC2	Q02817	5179 aa		3.12	□□□□□ -1.91
SCFD1-223	ENST00000557076		A0A075B6Q4	140 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	CORT	O00230	105 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	ISLR	O14498	428 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	SOCS3	O14543	225 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	GSTZ1	O43708	216 aa	Predicted RBP	3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	PGLYRP1	O75594	196 aa	Predicted RBP	3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	NDUFB4	O95168	129 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	G6PC	P35575	357 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	LPAR6	P43657	344 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	CLDN12	P56749	244 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	PRCD	Q00LT1	54 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	DHODH	Q02127	395 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	ASAH1	Q13510	395 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	C1orf194	Q5T5A4	169 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	AADACL3	Q5VUY0	350 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	SAMD13	Q5VXD3	122 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	ZNF818P	Q6ZRF7	136 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076		Q6ZRU5	148 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	TMEM144	Q7Z5S9	345 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	TMED4	Q7Z7H5	227 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	ARL6IP6	Q8N6S5	226 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	SLC24A4	Q8NFF2	622 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	OR51H1	Q8NH63	302 aa		3.11	□□□□□ -1.91
SCFD1-223	ENST00000557076	FCAMR	Q8WWV6	532 aa		3.11	□□□□□ -1.91

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