RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 NEU4Q8WWR8 484 aaPredicted RBP4.28□□□□□ -1.72
GPHN-213ENST00000556501 NUDT11Q96G61 164 aa4.28□□□□□ -1.72
GPHN-213ENST00000556501 KCNS1Q96KK3 526 aa4.28□□□□□ -1.72
GPHN-213ENST00000556501 LINC00479Q96M42 142 aa4.28□□□□□ -1.72
GPHN-213ENST00000556501 NDUFAF3Q9BU61 184 aa4.28□□□□□ -1.72
GPHN-213ENST00000556501 MLST8Q9BVC4 326 aa4.28□□□□□ -1.72
GPHN-213ENST00000556501 Q9H3A6 140 aa4.28□□□□□ -1.72
GPHN-213ENST00000556501 GSX1Q9H4S2 264 aaPredicted RBP4.28□□□□□ -1.72
GPHN-213ENST00000556501 GNB4Q9HAV0 340 aa4.28□□□□□ -1.72
GPHN-213ENST00000556501 OTORQ9NRC9 128 aa4.28□□□□□ -1.72
GPHN-213ENST00000556501 SERTAD4Q9NUC0 356 aa4.28□□□□□ -1.72
GPHN-213ENST00000556501 DPM3Q9P2X0 92 aa4.28□□□□□ -1.72
GPHN-213ENST00000556501 ZFHX4Q86UP3 3567 aa4.28□□□□□ -1.72
GPHN-213ENST00000556501 LOC105371242A0A075B767 164 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 IGHV3-21A0A0B4J1V1 117 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 A0A1B0GXF2 115 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 C19orf71A6NCJ1 209 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 PGPA6NDG6 321 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 OOSP1A8MZH6 123 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 H3BRN7 92 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 OR2J3O76001 311 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 LY6HO94772 140 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 SCGB1D1O95968 90 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 LTAP01374 205 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 APCSP02743 223 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 TCRAP04437 139 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 APELAP0DMC3 54 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 HIST1H1EP10412 219 aaKnown RBP4.27□□□□□ -1.73
GPHN-213ENST00000556501 PSG1P11464 419 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 PRTN3P24158 256 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 BRS3P32247 399 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 GPR6P46095 362 aaPredicted RBP4.27□□□□□ -1.73
GPHN-213ENST00000556501 KLRD1Q13241 179 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 C5orf64Q2M2E5 130 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 LBHQ53QV2 105 aaPredicted RBP4.27□□□□□ -1.73
GPHN-213ENST00000556501 C1orf194Q5T5A4 169 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 ZNF600Q6ZNG1 722 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 C1orf122Q6ZSJ8 110 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 ATP5L2Q7Z4Y8 100 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 BLNKQ8WV28 456 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 FAM168AQ92567 244 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 TMEM68Q96MH6 324 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 ZNF48Q96MX3 618 aaPredicted RBP4.27□□□□□ -1.73
GPHN-213ENST00000556501 GPR82Q96P67 336 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 RBM14Q96PK6 669 aaKnown RBP4.27□□□□□ -1.73
GPHN-213ENST00000556501 RASL11BQ9BPW5 248 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 HSPB9Q9BQS6 159 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 SHANK2-AS3Q9BTD1 123 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 SSBP3Q9BWW4 388 aaPredicted RBP4.27□□□□□ -1.73
GPHN-213ENST00000556501 SLC25A39Q9BZJ4 359 aaPredicted RBP4.27□□□□□ -1.73
GPHN-213ENST00000556501 PRSS22Q9GZN4 317 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 RPP21Q9H633 154 aaKnown RBP4.27□□□□□ -1.73
GPHN-213ENST00000556501 ZNF331Q9NQX6 463 aaPredicted RBP4.27□□□□□ -1.73
GPHN-213ENST00000556501 ZNF586Q9NXT0 402 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 MRPL27Q9P0M9 148 aaKnown RBP4.27□□□□□ -1.73
GPHN-213ENST00000556501 SOX21Q9Y651 276 aaPredicted RBP4.27□□□□□ -1.73
GPHN-213ENST00000556501 USP24Q9UPU5 2620 aa4.27□□□□□ -1.73
GPHN-213ENST00000556501 WI2-2373I1.2A0A1W2PRP0 233 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 NPIPB5A8MRT5 1133 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 NPIPB6E9PJ23 425 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 SPINK4O60575 86 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 ZNF324O75467 553 aaPredicted RBP4.26□□□□□ -1.73
GPHN-213ENST00000556501 CNIH1O95406 144 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 CA1P00915 261 aaPredicted RBP4.26□□□□□ -1.73
GPHN-213ENST00000556501 GPX1P07203 203 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 SRIP30626 198 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 ARF6P62330 175 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 SLC35B1P78383 322 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 SLAQ13239 276 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 KLF5Q13887 457 aaPredicted RBP4.26□□□□□ -1.73
GPHN-213ENST00000556501 EBI3Q14213 229 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 ODF1Q14990 250 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 FBLN7Q53RD9 439 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 MINOS1Q5TGZ0 78 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 LEMD1Q68G75 181 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 PRR27Q6MZM9 219 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 CCDC144NLQ6NUI1 221 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 C16orf54Q6UWD8 224 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 TOMM20LQ6UXN7 152 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 LHFPL4Q7Z7J7 247 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 Q8N6K4 173 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 SIGLECL1Q8N7X8 197 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 NUP35Q8NFH5 326 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 OR4B1Q8NGF8 309 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 IGFBPL1Q8WX77 278 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 RCHY1Q96PM5 261 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 TBX15Q96SF7 602 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 NEU1Q99519 415 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 C20orf144Q9BQM9 153 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 C2orf88Q9BSF0 95 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 SAMD10Q9BYL1 202 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 GFRA4Q9GZZ7 299 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 ZMAT5Q9UDW3 170 aaKnown RBP4.26□□□□□ -1.73
GPHN-213ENST00000556501 FBXL7Q9UJT9 491 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 RPH3ALQ9UNE2 315 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 RNF24Q9Y225 148 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 MINOS1-NBL1R4GNA1 71 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 ZZEF1O43149 2961 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 CFAP47Q6ZTR5 3102 aa4.26□□□□□ -1.73
GPHN-213ENST00000556501 ATRXP46100 2492 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms