RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ZNF714Q96N38 554 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 TXN2Q99757 166 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 DCTN5Q9BTE1 182 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 SAP30LQ9HAJ7 183 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 BET1LQ9NYM9 111 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 PAM16Q9Y3D7 125 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 LSM4Q9Y4Z0 139 aaKnown RBP3.55□□□□□ -1.84
ATXN3-241ENST00000556374 SLC25A15Q9Y619 301 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 LINC00312Q9Y6C7 94 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 TACC2O95359 2948 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 DCHS2Q6V1P9 2916 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 PRRC2AP48634 2157 aaKnown RBP3.55□□□□□ -1.84
ATXN3-241ENST00000556374 FLNAP21333 2647 aaKnown RBP3.55□□□□□ -1.84
ATXN3-241ENST00000556374 CHD3Q12873 2000 aaKnown RBP3.54□□□□□ -1.84
ATXN3-241ENST00000556374 PRRC2CQ9Y520 2896 aaKnown RBP3.54□□□□□ -1.84
ATXN3-241ENST00000556374 A0A1B0GWJ7 208 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 IZUMO1RA6ND01 250 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 PRSS46E5RG02 174 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 PEX7O00628 323 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 ISLRO14498 428 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 NKX2-8O15522 239 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 ZNF253O75346 499 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 HSBP1O75506 76 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 TNFSF13O75888 250 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 IGHV3-7P01780 117 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 LINC00869P0C866 280 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 SAA1P0DJI8 122 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-241ENST00000556374 ESDP10768 282 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 PSG1P11464 419 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 CRYBB3P26998 211 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 HNRNPA3P51991 378 aaKnown RBP3.54□□□□□ -1.84
ATXN3-241ENST00000556374 TCL1AP56279 114 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 BRWD1-AS2P59051 145 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 NANOS2P60321 138 aaKnown RBP3.54□□□□□ -1.84
ATXN3-241ENST00000556374 CX3CL1P78423 397 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 MEF2CQ06413 473 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-241ENST00000556374 PMCHL1Q16048 86 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 C2orf83Q53S99 150 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 LRRC10Q5BKY1 277 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 COL5A1-AS1Q5SY13 56 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 C10orf113Q5VZT2 155 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 SPATA31B1PQ5VZV4 182 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 TEX43Q6ZNM6 134 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 C19orf35Q6ZS72 473 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 SSX8Q7RTT4 187 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 S100A7AQ86SG5 101 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 ZGRF1Q86YA3 2104 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 DOLPP1Q86YN1 238 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 TMEM256Q8N2U0 113 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 Q8N7P7 452 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 ZNF114Q8NC26 417 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 OCC1Q8TAD7 63 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 VN1R17PQ8TDU5 208 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 CACNG8Q8WXS5 425 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 TMEM190Q8WZ59 177 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 H1FXQ92522 213 aaKnown RBP3.54□□□□□ -1.84
ATXN3-241ENST00000556374 LEAP2Q969E1 77 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 FLYWCH2Q96CP2 140 aaKnown RBP3.54□□□□□ -1.84
ATXN3-241ENST00000556374 STARD4Q96DR4 205 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 SMIM12Q96EX1 92 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 WFIKKN1Q96NZ8 548 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 C20orf144Q9BQM9 153 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 MIEN1Q9BRT3 115 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 FAM103A1Q9BTL3 118 aaKnown RBP3.54□□□□□ -1.84
ATXN3-241ENST00000556374 PAXXQ9BUH6 204 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 UQCR10Q9UDW1 63 aa3.54□□□□□ -1.84
ATXN3-241ENST00000556374 RPUSD1Q9UJJ7 312 aaKnown RBP3.54□□□□□ -1.84
ATXN3-241ENST00000556374 MYO7BQ6PIF6 2116 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 TRBV20OR9-2A0A075B6H5 130 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 IGLV3-9A0A075B6K5 115 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 TRAV3A0A0B4J244 114 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 TCRBV4S1A1TA0A5B7 111 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 K7EN84 100 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 NDUFB3O43676 98 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 ZNF324O75467 553 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 SCGB2A1O75556 95 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 FOXH1O75593 365 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 MMP23AO75900 390 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 IGHV1-46P01743 117 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 NTF3P20783 257 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 G0S2P27469 103 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 SRIP30626 198 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 CHRNB4P30926 498 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 CA7P43166 264 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 PPOXP50336 477 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 TDGF1P3P51864 188 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 RPL8P62917 257 aaKnown RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 FXYD3Q14802 87 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 C17orf58Q2M2W7 97 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 SPATA45Q537H7 98 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 PRR27Q6MZM9 219 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 MRPL54Q6P161 138 aaKnown RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 IGFL2Q6UWQ7 119 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 SLC25A48Q6ZT89 311 aaKnown RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 ZNF833PQ6ZTB9 187 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 FAM231DQ6ZW35 169 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 ATP5L2Q7Z4Y8 100 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 FAM216BQ8N7L0 139 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 DEFB108BQ8NET1 73 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 OR4C13Q8NGP0 309 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms