RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 PFDN1O60925 122 aa1.61□□□□□ -2.15
KTN1-222ENST00000555506 OGNP20774 298 aaKnown RBP1.61□□□□□ -2.15
KTN1-222ENST00000555506 INSL3P51460 131 aa1.61□□□□□ -2.15
KTN1-222ENST00000555506 RPS19BP1Q86WX3 136 aaKnown RBP1.61□□□□□ -2.15
KTN1-222ENST00000555506 ST6GALNAC3Q8NDV1 305 aa1.61□□□□□ -2.15
KTN1-222ENST00000555506 CANT1Q8WVQ1 401 aa1.61□□□□□ -2.15
KTN1-222ENST00000555506 TEX37Q96LM6 180 aa1.61□□□□□ -2.15
KTN1-222ENST00000555506 MRPL32Q9BYC8 188 aaKnown RBP1.61□□□□□ -2.15
KTN1-222ENST00000555506 MED11Q9P086 117 aa1.61□□□□□ -2.15
KTN1-222ENST00000555506 COL4A1P02462 1669 aa1.61□□□□□ -2.15
KTN1-222ENST00000555506 MED1Q15648 1581 aaPredicted RBP1.6□□□□□ -2.15
KTN1-222ENST00000555506 CR1P17927 2039 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 ARPC5O15511 151 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 TRGC2P03986 189 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 NFYBP25208 207 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 FKBP2P26885 142 aaKnown RBP1.6□□□□□ -2.15
KTN1-222ENST00000555506 ZNF846Q147U1 533 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 FKBP1CQ5VVH2 108 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 LINC00471Q8N535 108 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 C3orf56Q8N813 242 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 OR9Q1Q8NGQ5 310 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 CCDC115Q96NT0 180 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 CCDC32Q9BV29 185 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 TMEM126AQ9H061 195 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 LAMTOR3Q9UHA4 124 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 ASB4Q9Y574 426 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 NUBP2Q9Y5Y2 271 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 NUP210LQ5VU65 1888 aa1.6□□□□□ -2.15
KTN1-222ENST00000555506 XIRP1Q702N8 1843 aaKnown RBP1.59□□□□□ -2.15
KTN1-222ENST00000555506 TECPR2O15040 1411 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 ADGBQ8N7X0 1667 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 ARHGEF28Q8N1W1 1705 aaKnown RBP1.59□□□□□ -2.15
KTN1-222ENST00000555506 IGKV1D-42A0A075B6H8 117 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 A0A087WX48 190 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 TLCD2A6NGC4 264 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 H7BYZ3 331 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 TMEM256-PLSCR3K7ERE1 68 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 CST8O60676 142 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 RPL7P18124 248 aaKnown RBP1.59□□□□□ -2.15
KTN1-222ENST00000555506 RPS3P23396 243 aaKnown RBP eCLIP1.59□□□□□ -2.15
KTN1-222ENST00000555506 POLR2HP52434 150 aaKnown RBP1.59□□□□□ -2.15
KTN1-222ENST00000555506 EIF5AP63241 154 aaKnown RBP1.59□□□□□ -2.15
KTN1-222ENST00000555506 ANGPTL5Q86XS5 388 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 PRR15Q8IV56 129 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 HIST1H2BLQ99880 126 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 AIF1LQ9BQI0 150 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 JPT1Q9UK76 154 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 EPDR1Q9UM22 224 aa1.59□□□□□ -2.15
KTN1-222ENST00000555506 ARHGEF10O15013 1369 aa1.59□□□□□ -2.16
KTN1-222ENST00000555506 CD109Q6YHK3 1445 aa1.59□□□□□ -2.16
KTN1-222ENST00000555506 MYH10P35580 1976 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 TRDV1A0A1B0GX56 115 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 OR2T1O43869 369 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 GGCTO75223 188 aaKnown RBP1.58□□□□□ -2.16
KTN1-222ENST00000555506 DHFRP00374 187 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 SRP14P37108 136 aaKnown RBP1.58□□□□□ -2.16
KTN1-222ENST00000555506 RPS28P62857 69 aaKnown RBP1.58□□□□□ -2.16
KTN1-222ENST00000555506 SPANXN5Q5MJ07 72 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 BCL2L15Q5TBC7 163 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 C1orf140Q5VVS0 124 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 C22orf39Q6P5X5 142 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 OTORQ9NRC9 128 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 SPANXA1Q9NS26 97 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 NUP210Q8TEM1 1887 aaPredicted RBP1.58□□□□□ -2.16
KTN1-222ENST00000555506 CPDO75976 1380 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 SBF1O95248 1867 aa1.58□□□□□ -2.16
KTN1-222ENST00000555506 OR10J4P0C629 311 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 BCL2P10415 239 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 UBE2BP63146 152 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 RTL8BQ17RB0 113 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 MAFIPQ8WZ33 124 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 YPEL2Q96QA6 119 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 SLC50A1Q9BRV3 221 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 C6orf62Q9GZU0 229 aaPredicted RBP1.57□□□□□ -2.16
KTN1-222ENST00000555506 TAS2R4Q9NYW5 299 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 MICAL3Q7RTP6 2002 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 HEATR5BQ9P2D3 2071 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 BCL9O00512 1426 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 CEP152O94986 1710 aa1.57□□□□□ -2.16
KTN1-222ENST00000555506 MRPS14O60783 128 aaKnown RBP1.56□□□□□ -2.16
KTN1-222ENST00000555506 FAM107AO95990 144 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 PRB1P04280 392 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 HMGN1P05114 100 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 DYNLT3P51808 116 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 PLCXD2Q0VAA5 305 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 KRTAP21-3Q3LHN1 58 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 HRCT1Q6UXD1 115 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 PHF5AQ7RTV0 110 aaKnown RBP1.56□□□□□ -2.16
KTN1-222ENST00000555506 DEFB119Q8N690 84 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 ISOC1Q96CN7 298 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 CYSTM1Q9H1C7 97 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 NHP2Q9NX24 153 aaKnown RBP1.56□□□□□ -2.16
KTN1-222ENST00000555506 RNF11Q9Y3C5 154 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 MED31Q9Y3C7 131 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 CAMSAP2Q08AD1 1489 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 SORL1Q92673 2214 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 RIMBP3CA6NJZ7 1639 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 RIMBP3BA6NNM3 1639 aa1.56□□□□□ -2.16
KTN1-222ENST00000555506 RIMBP3Q9UFD9 1639 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms