RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 CREBL2O60519 120 aaPredicted RBP2.35□□□□□ -2.03
VRK1-205ENST00000555402 LYZL6O75951 148 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 CST7O76096 145 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 SCTP09683 121 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 FABP2P12104 132 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 RNASE4P34096 147 aaKnown RBP2.35□□□□□ -2.03
VRK1-205ENST00000555402 SDC2P34741 201 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 DYNLT3P51808 116 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 DNAJB13P59910 316 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 C4orf22Q6V702 233 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 LRRC28Q86X40 367 aaPredicted RBP2.35□□□□□ -2.03
VRK1-205ENST00000555402 OR4X2Q8NGF9 303 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 C1orf54Q8WWF1 131 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 ZC2HC1AQ96GY0 325 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 YPEL2Q96QA6 119 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 MRPL32Q9BYC8 188 aaKnown RBP2.35□□□□□ -2.03
VRK1-205ENST00000555402 KRTAP4-1Q9BYQ7 146 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 NDUFB11Q9NX14 153 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 NAT8BQ9UHF3 227 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 MYH11P35749 1972 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 SLIT2O94813 1529 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 CCDC88AQ3V6T2 1871 aa2.35□□□□□ -2.03
VRK1-205ENST00000555402 MYO9BQ13459 2157 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 OVOS2A0A0J9YW53 1432 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 OVOS2Q6IE36 1432 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 SPEF2Q9C093 1822 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 MIF4GDA9UHW6 222 aaKnown RBP2.34□□□□□ -2.03
VRK1-205ENST00000555402 LY6LH3BQJ8 138 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 C19orf84I3L1E1 186 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 TPST1O60507 370 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 PGLYRP1O75594 196 aaPredicted RBP2.34□□□□□ -2.03
VRK1-205ENST00000555402 NAPSAO96009 420 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 ZNF728P0DKX0 622 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 CD24P25063 80 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 RPL28P46779 137 aaKnown RBP2.34□□□□□ -2.03
VRK1-205ENST00000555402 TMBIM6P55061 237 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 ARPP19P56211 112 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 SUPT4H1P63272 117 aaKnown RBP2.34□□□□□ -2.03
VRK1-205ENST00000555402 HIST1H1AQ02539 215 aaPredicted RBP2.34□□□□□ -2.03
VRK1-205ENST00000555402 SS18Q15532 418 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 MSMO1Q15800 293 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 NDUFA5Q16718 116 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 Q5XG85 94 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 OR51A4Q8NGJ6 313 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 AP1S3Q96PC3 154 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 TXNDC17Q9BRA2 123 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 C2orf88Q9BSF0 95 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 ADAT1Q9BUB4 502 aaKnown RBP2.34□□□□□ -2.03
VRK1-205ENST00000555402 ZNF471Q9BX82 626 aaPredicted RBP2.34□□□□□ -2.03
VRK1-205ENST00000555402 TCEAL2Q9H3H9 227 aaPredicted RBP2.34□□□□□ -2.03
VRK1-205ENST00000555402 RNF11Q9Y3C5 154 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 HIVEP2P31629 2446 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 OBSL1O75147 1896 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 FER1L6Q2WGJ9 1857 aa2.34□□□□□ -2.03
VRK1-205ENST00000555402 NYNRINQ9P2P1 1898 aaKnown RBP2.34□□□□□ -2.03
VRK1-205ENST00000555402 EIF4G3O43432 1585 aaKnown RBP2.33□□□□□ -2.04
VRK1-205ENST00000555402 KDM5CP41229 1560 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 TRGV10A0A0A0MS01 117 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 TRGV5A0A0B4J1U4 118 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 MEIS3P1A6NDR6 274 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 K7ERJ3 54 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 SLC22A1O15245 554 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 DLEU1O43261 78 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 NDUFB3O43676 98 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 NDUFA6P56556 154 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 KHDC3LQ587J8 217 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 C22orf39Q6P5X5 142 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 SLC35E3Q7Z769 313 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 PFN4Q8NHR9 129 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 LXNQ9BS40 222 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 TTTY12Q9BZ98 90 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 TMEM106BQ9NUM4 274 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 CALML5Q9NZT1 146 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 FAM215AQ9Y5M1 114 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 RIMS1Q86UR5 1692 aaKnown RBP2.33□□□□□ -2.04
VRK1-205ENST00000555402 PHLPP1O60346 1717 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 PTPRGP23470 1445 aa2.33□□□□□ -2.04
VRK1-205ENST00000555402 RIMBP3CA6NJZ7 1639 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 RIMBP3BA6NNM3 1639 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 TRPM1Q7Z4N2 1603 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 RIMBP3Q9UFD9 1639 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 PCNX2A6NKB5 2137 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 NALCNQ8IZF0 1738 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 MEIKINA0A087WXM9 373 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 TRBV7-6A0A0J9YX20 115 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 M0R2Z0 102 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 PAEPP09466 180 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 EVI2AP22794 236 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 RPL35P42766 123 aaKnown RBP2.32□□□□□ -2.04
VRK1-205ENST00000555402 NCS1P62166 190 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 NEDD8Q15843 81 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 SOSTDC1Q6X4U4 206 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 DYNAPQ8N1N2 210 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 TEX29Q8N6K0 151 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 BRK1Q8WUW1 75 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 Q9BRP9 147 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 PRADC1Q9BSG0 188 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 NPCDR1Q9BY65 106 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 LPAR5Q9H1C0 372 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms