RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SPACA3Q8IXA5 215 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 LINC00518Q8N0U6 118 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 DKK4Q9UBT3 224 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 CACNA1AO00555 2505 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 GNLYP22749 145 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 MRPL52Q86TS9 123 aaKnown RBP5.73□□□□□ -1.49
SYNE2-216ENST00000555002 CACNG8Q8WXS5 425 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 PSG8Q9UQ74 426 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 SLC25A38Q96DW6 304 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 IGHG3P01860 377 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 ADMP35318 185 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 CSRP2Q16527 193 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 IFI27L1Q96BM0 104 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 SCRT1Q9BWW7 348 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 C15orf61A6NNL5 157 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 F8VVB4 439 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 F8VWA3 439 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 NR2C2APQ86WQ0 139 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 MAPK1IP1LQ8NDC0 245 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 WDYHV1Q96HA8 205 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 SCN10AQ9Y5Y9 1956 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 UBE2BP63146 152 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 Q8TAT8 98 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 COX5BP10606 129 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 E9PQ18 207 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 TICRRQ7Z2Z1 1910 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 LY75O60449 1722 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 IRF3Q14653 427 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 EXOC3-AS1Q8N2X6 119 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 C14orf178Q8N769 122 aaPredicted RBP5.72□□□□□ -1.49
SYNE2-216ENST00000555002 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.72□□□□□ -1.49
SYNE2-216ENST00000555002 DEFB105AQ8NG35 78 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 TECTAO75443 2155 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 TRBV5-7A0A0A0MS05 114 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 TMEM144Q7Z5S9 345 aa5.72□□□□□ -1.49
SYNE2-216ENST00000555002 RAMP1O60894 148 aa5.71□□□□□ -1.49
SYNE2-216ENST00000555002 INAFM2P0DMQ5 153 aa5.71□□□□□ -1.49
SYNE2-216ENST00000555002 PMVKQ15126 192 aa5.71□□□□□ -1.49
SYNE2-216ENST00000555002 IGFL4Q6B9Z1 124 aa5.71□□□□□ -1.49
SYNE2-216ENST00000555002 BAALCQ8WXS3 180 aa5.71□□□□□ -1.49
SYNE2-216ENST00000555002 DEPPQ9NTK1 212 aa5.71□□□□□ -1.49
SYNE2-216ENST00000555002 MYMXA0A1B0GTQ4 84 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 ZNF329Q86UD4 541 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 PRSS29PA6NIE9 313 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 UPK2O00526 184 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 PRIMA1Q86XR5 153 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 SP7Q8TDD2 431 aaPredicted RBP5.71□□□□□ -1.5
SYNE2-216ENST00000555002 FRMPD3Q5JV73 1810 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 LINC00587B1AMM8 73 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 H3BUX3 64 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 OR10W1Q8NGF6 305 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 HCFC1P51610 2035 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 TRAV9-2A0A087WT02 112 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 A0A0G2JK05 382 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 MMP23AO75900 390 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 OR9G9P0C7N8 305 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 A6NNC1 897 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 CEACAM1P13688 526 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 RIPPLY2Q5TAB7 128 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 LINC00477Q96M19 166 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 PRDM13Q9H4Q3 707 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 PRSS23O95084 383 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 DNAJC30Q96LL9 226 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 SLC25A39Q9BZJ4 359 aaPredicted RBP5.71□□□□□ -1.5
SYNE2-216ENST00000555002 GTSF1LQ9H1H1 148 aa5.71□□□□□ -1.5
SYNE2-216ENST00000555002 CD55P08174 381 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 PFN2P35080 140 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 SCRT2Q9NQ03 307 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 DSCAMO60469 2012 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 GAGE12JA6NER3 117 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 C5orf67F2Z3F1 127 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 SMKR1H3BMG3 65 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 SUPT4H1P63272 117 aaKnown RBP5.7□□□□□ -1.5
SYNE2-216ENST00000555002 GAGE1Q13065 139 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 GAGE4Q13068 117 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 GAGE5Q13069 117 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 KLF5Q13887 457 aaPredicted RBP5.7□□□□□ -1.5
SYNE2-216ENST00000555002 TPTE2P1Q5T6R2 138 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 UBR3Q6ZT12 1888 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 IGHV4-4A0A075B6R2 117 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 MLNRO43193 412 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 CRLF1O75462 422 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 RMI2Q96E14 147 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 F2Z2F3 143 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 NDUFS8O00217 210 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 SPXQ9BT56 116 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 A0A096LPF7 62 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 TEX48A0A1B0GUV7 120 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 NMBP08949 121 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 SELLP14151 372 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 VWC2Q2TAL6 325 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 RNF166Q96A37 237 aaPredicted RBP5.7□□□□□ -1.5
SYNE2-216ENST00000555002 MBNL3Q9NUK0 354 aaKnown RBP5.7□□□□□ -1.5
SYNE2-216ENST00000555002 NXPH4O95158 308 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 MESP2Q0VG99 397 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 TAL2Q16559 108 aa5.7□□□□□ -1.5
SYNE2-216ENST00000555002 RNF223E7ERA6 249 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 C1QTNF9P0C862 333 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 SBF2Q86WG5 1849 aa5.69□□□□□ -1.5
SYNE2-216ENST00000555002 D6R8Y8 96 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms