RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 IFNA5P01569 189 aa9.82□□□□□ -0.84
SHMT2-211ENST00000554310 CAMLGP49069 296 aa9.82□□□□□ -0.84
SHMT2-211ENST00000554310 TMEM217Q8N7C4 229 aa9.82□□□□□ -0.84
SHMT2-211ENST00000554310 RCHY1Q96PM5 261 aa9.82□□□□□ -0.84
SHMT2-211ENST00000554310 TM2D3Q9BRN9 247 aa9.82□□□□□ -0.84
SHMT2-211ENST00000554310 HRH4Q9H3N8 390 aa9.82□□□□□ -0.84
SHMT2-211ENST00000554310 TUBA4BQ9H853 241 aa9.82□□□□□ -0.84
SHMT2-211ENST00000554310 TMEM218A2RU14 115 aa9.81□□□□□ -0.84
SHMT2-211ENST00000554310 SCGB2A1O75556 95 aa9.81□□□□□ -0.84
SHMT2-211ENST00000554310 IGHV3-48P01763 117 aa9.81□□□□□ -0.84
SHMT2-211ENST00000554310 CD7P09564 240 aa9.81□□□□□ -0.84
SHMT2-211ENST00000554310 METTL15P1P0C7V9 234 aa9.81□□□□□ -0.84
SHMT2-211ENST00000554310 OPRK1P41145 380 aa9.81□□□□□ -0.84
SHMT2-211ENST00000554310 ATP6V1FQ16864 119 aa9.81□□□□□ -0.84
SHMT2-211ENST00000554310 DPPA3Q6W0C5 159 aa9.81□□□□□ -0.84
SHMT2-211ENST00000554310 RBPMS2Q6ZRY4 209 aaKnown RBP9.81□□□□□ -0.84
SHMT2-211ENST00000554310 SLC24A4Q8NFF2 622 aa9.81□□□□□ -0.84
SHMT2-211ENST00000554310 OR2G3Q8NGZ4 309 aa9.81□□□□□ -0.84
SHMT2-211ENST00000554310 DTD1Q8TEA8 209 aa9.81□□□□□ -0.84
SHMT2-211ENST00000554310 SPAG8Q99932 426 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-211ENST00000554310 HEYLQ9NQ87 328 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-211ENST00000554310 CEBPZOSA8MTT3 80 aa9.8□□□□□ -0.84
SHMT2-211ENST00000554310 YIF1AO95070 293 aa9.8□□□□□ -0.84
SHMT2-211ENST00000554310 M6PRP20645 277 aa9.8□□□□□ -0.84
SHMT2-211ENST00000554310 ARL16Q0P5N6 197 aa9.8□□□□□ -0.84
SHMT2-211ENST00000554310 SPANXN5Q5MJ07 72 aa9.8□□□□□ -0.84
SHMT2-211ENST00000554310 C10orf91Q5T1B1 145 aa9.8□□□□□ -0.84
SHMT2-211ENST00000554310 TMEM182Q6ZP80 229 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-211ENST00000554310 SCGB1C1Q8TD33 95 aa9.8□□□□□ -0.84
SHMT2-211ENST00000554310 ZNF414Q96IQ9 312 aa9.8□□□□□ -0.84
SHMT2-211ENST00000554310 PSMG3Q9BT73 122 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-211ENST00000554310 HIPK2Q9H2X6 1198 aa9.8□□□□□ -0.84
SHMT2-211ENST00000554310 SELENOKQ9Y6D0 94 aa9.8□□□□□ -0.84
SHMT2-211ENST00000554310 HUWE1Q7Z6Z7 4374 aaKnown RBP9.79□□□□□ -0.84
SHMT2-211ENST00000554310 IGHV3OR16-8A0A075B7F1 116 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 PMS2P5A8MQ11 134 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 OR11H12B2RN74 326 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 TSPAN4O14817 238 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 CD5P06127 495 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 BMI1P35226 326 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 SLC38A11Q08AI6 406 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 HAGHQ16775 308 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 C2orf83Q53S99 150 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 ZNF600Q6ZNG1 722 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 LILRB2Q8N423 598 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 OR4X1Q8NH49 305 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 RNASEH2CQ8TDP1 164 aaKnown RBP9.79□□□□□ -0.84
SHMT2-211ENST00000554310 SPATA25Q9BR10 227 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 FNDC4Q9H6D8 234 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-211ENST00000554310 SRD5A3Q9H8P0 318 aa9.79□□□□□ -0.84
SHMT2-211ENST00000554310 IGHV7-4-1A0A0J9YVY3 117 aa9.78□□□□□ -0.84
SHMT2-211ENST00000554310 ZNF207O43670 478 aaKnown RBP9.78□□□□□ -0.84
SHMT2-211ENST00000554310 CLN5O75503 358 aa9.78□□□□□ -0.84
SHMT2-211ENST00000554310 NPY1RP25929 384 aa9.78□□□□□ -0.84
SHMT2-211ENST00000554310 LINC00322Q6ZN03 302 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-211ENST00000554310 DEFB125Q8N687 156 aa9.78□□□□□ -0.84
SHMT2-211ENST00000554310 FAM213BQ8TBF2 198 aa9.78□□□□□ -0.84
SHMT2-211ENST00000554310 NARS2Q96I59 477 aaKnown RBP9.78□□□□□ -0.84
SHMT2-211ENST00000554310 WFDC10AQ9H1F0 79 aa9.78□□□□□ -0.84
SHMT2-211ENST00000554310 TREM1Q9NP99 234 aa9.78□□□□□ -0.84
SHMT2-211ENST00000554310 UQCC1Q9NVA1 299 aa9.78□□□□□ -0.84
SHMT2-211ENST00000554310 SMPXQ9UHP9 88 aa9.78□□□□□ -0.84
SHMT2-211ENST00000554310 CARHSP1Q9Y2V2 147 aaKnown RBP9.78□□□□□ -0.84
SHMT2-211ENST00000554310 TIMM9Q9Y5J7 89 aa9.78□□□□□ -0.84
SHMT2-211ENST00000554310 NBEAL2Q6ZNJ1 2754 aa9.78□□□□□ -0.84
SHMT2-211ENST00000554310 OR4C46A6NHA9 309 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 APOC3P02656 99 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 RPP30P78346 268 aaKnown RBP9.77□□□□□ -0.85
SHMT2-211ENST00000554310 SERF2P84101 59 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
SHMT2-211ENST00000554310 VWC2Q2TAL6 325 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 AKR1C8PQ5T2L2 129 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 TOMM20LQ6UXN7 152 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 TMEM116Q8NCL8 245 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 OR10P1Q8NGE3 313 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 TMEM147Q9BVK8 224 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 RHPN1-AS1Q9BWJ2 59 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 SEC11CQ9BY50 192 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 WDR61Q9GZS3 305 aaKnown RBP9.77□□□□□ -0.85
SHMT2-211ENST00000554310 ZFAND3Q9H8U3 227 aa9.77□□□□□ -0.85
SHMT2-211ENST00000554310 MRPL36Q9P0J6 103 aaKnown RBP9.77□□□□□ -0.85
SHMT2-211ENST00000554310 PUS1Q9Y606 427 aaKnown RBP eCLIP9.77□□□□□ -0.85
SHMT2-211ENST00000554310 TRAV30A0A087WSZ9 112 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 CHEK1O14757 476 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 SCO1O75880 301 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 HBE1P02100 147 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 ATP5IP56385 69 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-211ENST00000554310 AKR1C1Q04828 323 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 PEA15Q15121 130 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 ETFRF1Q6IPR1 90 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 TMEM170AQ8WVE7 144 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 RNF2Q99496 336 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 SCRT1Q9BWW7 348 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 SMDT1Q9H4I9 107 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 RFNGQ9Y644 331 aa9.76□□□□□ -0.85
SHMT2-211ENST00000554310 TRAV1-1A0A0B4J248 108 aa9.75□□□□□ -0.85
SHMT2-211ENST00000554310 F8W036 122 aa9.75□□□□□ -0.85
SHMT2-211ENST00000554310 IFNA10P01566 189 aa9.75□□□□□ -0.85
SHMT2-211ENST00000554310 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
SHMT2-211ENST00000554310 ADCYAP1P18509 176 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms