RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PRDX2P32119 198 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 MPV17P39210 176 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 CTRLP40313 264 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 REG1BP48304 166 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 SUB1P53999 127 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS33B-203ENST00000554264 KLF3P57682 345 aaPredicted RBP4.76□□□□□ -1.65
VPS33B-203ENST00000554264 BRWD1-AS2P59051 145 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 PRCDQ00LT1 54 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 AESQ08117 197 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 FAM27E3Q08E93 113 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 PSG7Q13046 419 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 CLEC12BQ2HXU8 276 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 CENPWQ5EE01 88 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 PSMG4Q5JS54 123 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 MIC13Q5XKP0 118 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 STUMQ69YW2 141 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 TMEM136Q6ZRR5 245 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 SSX8Q7RTT4 187 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 ZNF738Q8NE65 137 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 OR5T1Q8NG75 326 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 OR4P4Q8NGL7 312 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 VSTM2AQ8TAG5 236 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 OSR1Q8TAX0 266 aaPredicted RBP4.76□□□□□ -1.65
VPS33B-203ENST00000554264 MRGPRDQ8TDS7 321 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 VN1R17PQ8TDU5 208 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 CHCHD1Q96BP2 118 aaKnown RBP4.76□□□□□ -1.65
VPS33B-203ENST00000554264 GRAMD2BQ96HH9 432 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 TXN2Q99757 166 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 LINC00574Q9H8X3 128 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 NRN1Q9NPD7 142 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 CLCF1Q9UBD9 225 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 LAMTOR2Q9Y2Q5 125 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 PAM16Q9Y3D7 125 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 YTHDF2Q9Y5A9 579 aaKnown RBP4.76□□□□□ -1.65
VPS33B-203ENST00000554264 VPS13CQ709C8 3753 aa4.76□□□□□ -1.65
VPS33B-203ENST00000554264 NBEAL1Q6ZS30 2694 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 TRAV9-2A0A087WT02 112 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 IGHV1-69-2A0A0G2JMI3 117 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 J3QR06 171 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 K7EN84 100 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 RRHO14718 337 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 TOMM40O96008 361 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 IGLV1-44P01699 117 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 IGLC2P0DOY2 106 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 IGLC3P0DOY3 106 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 IRF2P14316 349 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 G0S2P27469 103 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 LOXP28300 417 aaPredicted RBP4.75□□□□□ -1.65
VPS33B-203ENST00000554264 COMPP49747 757 aaPredicted RBP4.75□□□□□ -1.65
VPS33B-203ENST00000554264 KRTDAPP60985 99 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 OR5I1Q13606 314 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 PSG5Q15238 335 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 SPATA45Q537H7 98 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 ETFRF1Q6IPR1 90 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 C11orf53Q8IXP5 236 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 OR8I2Q8N0Y5 310 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 MAPK1IP1LQ8NDC0 245 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 ZNF439Q8NDP4 499 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 OR13A1Q8NGR1 328 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 C5orf30Q96GV9 206 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 NABP2Q9BQ15 211 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 PMCHL2Q9BQD1 86 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 DERL1Q9BUN8 251 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 GFRA4Q9GZZ7 299 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 IFI27L2Q9H2X8 130 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 GNB4Q9HAV0 340 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 ST20Q9HBF5 79 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 TP53TG3Q9ULZ0 132 aa4.75□□□□□ -1.65
VPS33B-203ENST00000554264 IGHV2-26A0A0B4J1V2 119 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-203ENST00000554264 A0A1B0GW15 77 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 A0A1W2PS18 150 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 GRIFINA4D1Z8 144 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 K7EP13 123 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 UPK2O00526 184 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 CRXO43186 299 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-203ENST00000554264 HSBP1O75506 76 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 CA2P00918 260 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 HLA-DRB1P01911 266 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 APOA2P02652 100 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 EGR1P18146 543 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 USF1P22415 310 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-203ENST00000554264 IGHV1-2P23083 117 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 SSTR5P35346 364 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 FOXG1P55316 489 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-203ENST00000554264 MRPS11P82912 194 aaKnown RBP4.74□□□□□ -1.65
VPS33B-203ENST00000554264 ERHP84090 104 aaKnown RBP4.74□□□□□ -1.65
VPS33B-203ENST00000554264 CFHR3Q02985 330 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 GUSBP1Q15486 140 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 PRSS8Q16651 343 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 KRTAP24-1Q3LI83 254 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 LEMD1Q68G75 181 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 OR4A47Q6IF82 309 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 ZNF474Q6S9Z5 364 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-203ENST00000554264 Q6ZN92 141 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 TCF23Q7RTU1 214 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 MED12LQ86YW9 2145 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 CNEP1R1Q8N9A8 125 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 C8orf31Q8N9H6 132 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 ZNF114Q8NC26 417 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms