RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TMEM158Q8WZ71 300 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 HHLA3Q9XRX5 114 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 UNC80Q8N2C7 3258 aa7.67□□□□□ -1.18
SIX4-202ENST00000554079 TRBV7-3A0A075B6L6 115 aa7.67□□□□□ -1.18
SIX4-202ENST00000554079 TRAV4A0A0B4J268 109 aa7.67□□□□□ -1.18
SIX4-202ENST00000554079 SMIM9A6NGZ8 99 aa7.67□□□□□ -1.18
SIX4-202ENST00000554079 CXCL12P48061 93 aa7.67□□□□□ -1.18
SIX4-202ENST00000554079 GNG5P63218 68 aa7.67□□□□□ -1.18
SIX4-202ENST00000554079 DEFB103AP81534 67 aa7.67□□□□□ -1.18
SIX4-202ENST00000554079 MBNL2Q5VZF2 373 aaKnown RBP7.67□□□□□ -1.18
SIX4-202ENST00000554079 MOB3BQ86TA1 216 aa7.67□□□□□ -1.18
SIX4-202ENST00000554079 MRPL32Q9BYC8 188 aaKnown RBP7.67□□□□□ -1.18
SIX4-202ENST00000554079 OR2H1Q9GZK4 316 aa7.67□□□□□ -1.18
SIX4-202ENST00000554079 FAM234AQ9H0X4 552 aa7.67□□□□□ -1.18
SIX4-202ENST00000554079 ZNF576Q9H609 170 aa7.67□□□□□ -1.18
SIX4-202ENST00000554079 DNAH14Q0VDD8 3507 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 IGKV1OR2-108A0A075B7D4 117 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 IGHV3-15A0A0B4J1V0 119 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 DLL1O00548 723 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 P01737 135 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 HBDP02042 147 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 MYCNOSP40205 109 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 OR1C1Q15619 314 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 SPRNQ5BIV9 151 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 ZNF766Q5HY98 468 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 C1orf210Q8IVY1 113 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 DNAJC30Q96LL9 226 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 LINC01587Q99440 93 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 CITED2Q99967 270 aaPredicted RBP7.66□□□□□ -1.18
SIX4-202ENST00000554079 PRDM14Q9GZV8 571 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 FBXL15Q9H469 300 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 KLF12Q9Y4X4 402 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 CRLF1O75462 422 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 TTC32Q5I0X7 151 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 UCN2Q96RP3 112 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 SPRY4Q9C004 299 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 AKIRIN1Q9H9L7 192 aaPredicted RBP7.66□□□□□ -1.18
SIX4-202ENST00000554079 KLRF1Q9NZS2 232 aa7.66□□□□□ -1.18
SIX4-202ENST00000554079 TRAV3A0A0B4J244 114 aa7.65□□□□□ -1.18
SIX4-202ENST00000554079 MOSP00540 346 aa7.65□□□□□ -1.18
SIX4-202ENST00000554079 PYYP10082 97 aa7.65□□□□□ -1.18
SIX4-202ENST00000554079 EVI2AP22794 236 aa7.65□□□□□ -1.18
SIX4-202ENST00000554079 PPP1R27Q86WC6 154 aa7.65□□□□□ -1.18
SIX4-202ENST00000554079 RASL11BQ9BPW5 248 aa7.65□□□□□ -1.18
SIX4-202ENST00000554079 KNTC1P50748 2209 aa7.65□□□□□ -1.18
SIX4-202ENST00000554079 SEC16AO15027 2179 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 CEACAM4O75871 244 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 SPINK2P20155 84 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 FXYD7P58549 80 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 TMEM196Q5HYL7 178 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 KLF17Q5JT82 389 aaPredicted RBP7.64□□□□□ -1.19
SIX4-202ENST00000554079 MAPKAPK5-AS1Q8N8E1 139 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 LINC01619G3V211 115 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 SNCGO76070 127 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 OR2H2O95918 312 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 CELA2AP08217 269 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 COL8A1P27658 744 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 ASIPP42127 132 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 C1orf61Q13536 156 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 ANKRD29Q8N6D5 301 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 SSUH2Q9Y2M2 353 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 U3KQK5 164 aa7.64□□□□□ -1.19
SIX4-202ENST00000554079 A0A1W2PQF6 199 aa7.63□□□□□ -1.19
SIX4-202ENST00000554079 C12orf77C9JDV5 145 aa7.63□□□□□ -1.19
SIX4-202ENST00000554079 ARMS2P0C7Q2 107 aa7.63□□□□□ -1.19
SIX4-202ENST00000554079 TNFRSF1AP19438 455 aa7.63□□□□□ -1.19
SIX4-202ENST00000554079 SLC25A48Q6ZT89 311 aaKnown RBP7.63□□□□□ -1.19
SIX4-202ENST00000554079 TUSC5Q8IXB3 177 aa7.63□□□□□ -1.19
SIX4-202ENST00000554079 SGK494Q96LW2 274 aa7.63□□□□□ -1.19
SIX4-202ENST00000554079 EPDR1Q9UM22 224 aa7.63□□□□□ -1.19
SIX4-202ENST00000554079 IGHV3-20A0A0C4DH32 117 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 LOC389332A0A1B0GUA5 103 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 A0A1B0GUT8 65 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 PSMB2P49721 201 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 UBE2D3P61077 147 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 UBE2D2P62837 147 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 Q6ZQT7 251 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 GTSCR1Q86UQ5 136 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 FADS6Q8N9I5 356 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 FXYD5Q96DB9 178 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 PAXXQ9BUH6 204 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 CDH23Q9H251 3354 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 IL4P05112 153 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 FKBP2P26885 142 aaKnown RBP7.62□□□□□ -1.19
SIX4-202ENST00000554079 FOXG1P55316 489 aaPredicted RBP7.62□□□□□ -1.19
SIX4-202ENST00000554079 FOXF2Q12947 444 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 RIGQ13278 110 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 VKORC1L1Q8N0U8 176 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 CIARTQ8N365 385 aaPredicted RBP7.62□□□□□ -1.19
SIX4-202ENST00000554079 RBMXL3Q8N7X1 1067 aaKnown RBP7.62□□□□□ -1.19
SIX4-202ENST00000554079 HIST1H4GQ99525 98 aa7.62□□□□□ -1.19
SIX4-202ENST00000554079 CACNA1DQ01668 2161 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 FCGR3BO75015 233 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 SS18L1O75177 396 aaPredicted RBP7.61□□□□□ -1.19
SIX4-202ENST00000554079 FSTL3O95633 263 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 IGKCP01834 107 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 LINC00694P0DN24 101 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 IGFBP4P22692 258 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 DAZAP1Q96EP5 407 aaKnown RBP7.61□□□□□ -1.19
SIX4-202ENST00000554079 ZNF714Q96N38 554 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms