RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SMIM1B2RUZ4 78 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 DNASE2O00115 360 aaPredicted RBP2.13□□□□□ -2.07
SLIRP-202ENST00000553981 GNG7O60262 68 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 CREBL2O60519 120 aaPredicted RBP2.13□□□□□ -2.07
SLIRP-202ENST00000553981 CLN5O75503 358 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 ATP5HO75947 161 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 DHFRP00374 187 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 PMP2P02689 132 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 CTXN2P0C2S0 81 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 HLA-DRB4P13762 266 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 F2RP25116 425 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 SDC2P34741 201 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 TALDO1P37837 337 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 ETV6P41212 452 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 NKX2-1P43699 371 aaPredicted RBP2.13□□□□□ -2.07
SLIRP-202ENST00000553981 DHODHQ02127 395 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 DHRS2Q13268 280 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 RCN1Q15293 331 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 MSMO1Q15800 293 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 ZNF79Q15937 498 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 BAK1Q16611 211 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 ESRGQ1W209 222 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 PHLDA2Q53GA4 152 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 AADACL3Q5VUY0 350 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 PRSS54Q6PEW0 395 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 ZNF600Q6ZNG1 722 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 UBE2DNLQ8IWF7 75 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 DUSP18Q8NEJ0 188 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 LHFPL5Q8TAF8 219 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 MOB3AQ96BX8 217 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 GPR146Q96CH1 333 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 ST6GAL2Q96JF0 529 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 TP53RKQ96S44 253 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 ATP6V0BQ99437 205 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 TXN2Q99757 166 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 NIPSNAP3BQ9BS92 247 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 ZNF2Q9BSG1 426 aaPredicted RBP2.13□□□□□ -2.07
SLIRP-202ENST00000553981 AUNIPQ9H7T9 357 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 ACOT13Q9NPJ3 140 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 NDUFB11Q9NX14 153 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 COMMD9Q9P000 198 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 THYN1Q9P016 225 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 DAPK2Q9UIK4 370 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 HLA-DRB4X5D2U9 266 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 TRAV8-2A0A0B4J237 113 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 HELTA6NFD8 242 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 INS-IGF2F8WCM5 200 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 ARL6IP5O75915 188 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 SLC22A5O76082 557 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 IFNA21P01568 189 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 IFNA17P01571 189 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 SPART-AS1P0CW21 52 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 GADD45AP24522 165 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 CMC4P56277 68 aaPredicted RBP2.12□□□□□ -2.07
SLIRP-202ENST00000553981 LINC00315P59091 139 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 GNG2P59768 71 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 KRTAP12-2P59991 146 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 KRTAP10-8P60410 259 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 HSPE1P61604 102 aaKnown RBP2.12□□□□□ -2.07
SLIRP-202ENST00000553981 RPP30P78346 268 aaKnown RBP2.12□□□□□ -2.07
SLIRP-202ENST00000553981 MXD1Q05195 221 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 OXA1LQ15070 435 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 SP6Q3SY56 376 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 THOC7Q6I9Y2 204 aaKnown RBP2.12□□□□□ -2.07
SLIRP-202ENST00000553981 SFXN4Q6P4A7 337 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 PRSS48Q7RTY5 328 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 ARRDC1Q8N5I2 433 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 PACRGLQ8N7B6 248 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 STPG4Q8N801 248 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 OR5AP2Q8NGF4 316 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 OR6F1Q8NGZ6 308 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 OR4X1Q8NH49 305 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 TRIM63Q969Q1 353 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 C18orf15Q96N68 181 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 CENPOQ9BU64 300 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 PARD6GQ9BYG4 376 aaPredicted RBP2.12□□□□□ -2.07
SLIRP-202ENST00000553981 C6orf62Q9GZU0 229 aaPredicted RBP2.12□□□□□ -2.07
SLIRP-202ENST00000553981 SAV1Q9H4B6 383 aaPredicted RBP2.12□□□□□ -2.07
SLIRP-202ENST00000553981 Q9H8V8 135 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 RHBDL2Q9NX52 303 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 ZNF586Q9NXT0 402 aa2.12□□□□□ -2.07
SLIRP-202ENST00000553981 RRP15Q9Y3B9 282 aaKnown RBP2.12□□□□□ -2.07
SLIRP-202ENST00000553981 TRAV12-2A0A075B6T6 113 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 IGKV1OR2-108A0A075B7D4 117 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 A0A0J9YX75 114 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 METTL21EPA6NDL7 271 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 M0R2Z0 102 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 GPR31O00270 319 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 EIF4EP06730 217 aaKnown RBP2.11□□□□□ -2.07
SLIRP-202ENST00000553981 NPPCP23582 126 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 PSMA1P25786 263 aaKnown RBP2.11□□□□□ -2.07
SLIRP-202ENST00000553981 HLA-DMAP28067 261 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 FGF9P31371 208 aaPredicted RBP2.11□□□□□ -2.07
SLIRP-202ENST00000553981 HRH1P35367 487 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 HNRNPA3P51991 378 aaKnown RBP2.11□□□□□ -2.07
SLIRP-202ENST00000553981 PAX9P55771 341 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 ARPC4P59998 168 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 VAMP2P63027 116 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 PAFAH1B2P68402 229 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 MRPS15P82914 257 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms