RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 NFYAP23511 347 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 F2RP25116 425 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RHOGP84095 191 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MXD1Q05195 221 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ATP5G2Q06055 141 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IQCJQ1A5X6 159 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 DEFB114Q30KQ6 69 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 Q499Y3 187 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 C1orf194Q5T5A4 169 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IDNKQ5T6J7 187 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CST9LP1Q5W188 147 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PRR27Q6MZM9 219 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GSG1LQ6UXU4 331 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 AHSA2Q719I0 299 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CBLN2Q8IUK8 224 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LAX1Q8IWV1 398 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LGI3Q8N145 548 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF738Q8NE65 137 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR52B4Q8NGK2 314 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR2K2Q8NGT1 345 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SMIM19Q96E16 107 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 USMG5Q96IX5 58 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RNF5Q99942 180 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 HDHD3Q9BSH5 251 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 KCNK15Q9H427 330 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 COMMD3Q9UBI1 195 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF230Q9UIE0 474 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 KLK5Q9Y337 293 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RPL36Q9Y3U8 105 aaKnown RBP4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LOC102724200A0A096LPH7 203 aaPredicted RBP4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TRBV5-5A0A0J9YX44 114 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 C2orf70A6NJV1 201 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CORTO00230 105 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GPR31O00270 319 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CCL25O15444 150 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LYRM1O43325 122 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SPRY2O43597 315 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 NXPH3O95157 252 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR2C1O95371 312 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 HPRT1P00492 218 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IGLV2-23P01705 113 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GIPP09681 153 aaPredicted RBP4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PET100P0DJ07 73 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RBMY1CP0DJD4 496 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 AKR1C4P17516 323 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PSMA1P25786 263 aaKnown RBP4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PSMB9P28065 219 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 KIR2DS2P43631 304 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 INPP1P49441 399 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PIGPP57054 158 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CKS1BP61024 79 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TPBGQ13641 420 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RHEBQ15382 184 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TNXAQ16473 311 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 DEFB135Q30KP9 77 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TMEM41BQ5BJD5 291 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GCSAMLQ5JQS6 135 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LY6G6FQ5SQ64 297 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PDPNQ86YL7 162 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 BOD1L2Q8IYS8 172 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TMEM61Q8N0U2 210 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF664Q8N3J9 261 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 Q8N9P0 234 aaPredicted RBP4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ADAD2Q8NCV1 583 aaKnown RBP4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR11H4Q8NGC9 324 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR4D5Q8NGN0 318 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 KCNG3Q8TAE7 436 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GGHQ92820 318 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SLC35E1Q96K37 410 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 AGMATQ9BSE5 352 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MAGT1Q9H0U3 335 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR51E2Q9H255 320 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CST9LQ9H4G1 147 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 WFDC1Q9HC57 220 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 FBXL17Q9UF56 701 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 EXOSC1Q9Y3B2 195 aaKnown RBP4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 S4R3C0 116 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 V9GYH0 126 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MUC2Q02817 5179 aa4.13□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TRBV5-7A0A0A0MS05 114 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SRRM4A7MD48 611 aaKnown RBP4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RTL8CO15255 209 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PLA2G10O15496 165 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PDE6DO43924 150 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PROP1O75360 226 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR2J3O76001 311 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 NDUFB8O95169 186 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 NAPSAO96009 420 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PMP2P02689 132 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SCTP09683 121 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR9G9P0C7N8 305 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 INAFM2P0DMQ5 153 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RPL35AP18077 110 aaKnown RBP4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 S100A7P31151 101 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CAMPP49913 170 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RPS11P62280 158 aaKnown RBP eCLIP4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LSM3P62310 102 aaKnown RBP4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 HLA-DRB3P79483 266 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms