RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 TAS2R45P59539 299 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 RHOBP62745 196 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 FLI1Q01543 452 aaPredicted RBP3.89□□□□□ -1.79
VTI1B-202ENST00000553619 C15orf32Q32M92 178 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 FAM106AQ4KMX7 169 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 TMEM41BQ5BJD5 291 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 FFAR4Q5NUL3 377 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 ALKAL2Q6UX46 152 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 Q6ZSV7 163 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 OR5AU1Q8NGC0 362 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 OR51G1Q8NGK1 321 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 OR10G4Q8NGN3 311 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 OR10G9Q8NGN4 311 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 OR10G7Q8NGN6 311 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 GATAD1Q8WUU5 269 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 TMED6Q8WW62 240 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 NARS2Q96I59 477 aaKnown RBP3.89□□□□□ -1.79
VTI1B-202ENST00000553619 UBE2E2Q96LR5 201 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 NOL4LQ96MY1 436 aaPredicted RBP3.89□□□□□ -1.79
VTI1B-202ENST00000553619 DUX5Q96PT3 197 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 RSG1Q9BU20 258 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 DNAJC4Q9NNZ3 241 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 PEF1Q9UBV8 284 aaKnown RBP3.89□□□□□ -1.79
VTI1B-202ENST00000553619 SLC45A2Q9UMX9 530 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 CHTOPQ9Y3Y2 248 aaKnown RBP3.89□□□□□ -1.79
VTI1B-202ENST00000553619 PXMP4Q9Y6I8 212 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.88□□□□□ -1.79
VTI1B-202ENST00000553619 IGHV3-21A0A0B4J1V1 117 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 CTXND1A0A1B0GTU2 59 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 CLPSL1A2RUU4 121 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 ZNF705EA8MWA4 302 aaPredicted RBP3.88□□□□□ -1.79
VTI1B-202ENST00000553619 BMPR1BO00238 502 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 GGCTO75223 188 aaKnown RBP3.88□□□□□ -1.79
VTI1B-202ENST00000553619 HYPMO75409 117 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 TOMM40O96008 361 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 OR5G3P0C626 314 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 IGLC1P0CG04 106 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 PSMB8P28062 276 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 ARL3P36405 182 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 TAGLN2P37802 199 aaKnown RBP3.88□□□□□ -1.79
VTI1B-202ENST00000553619 CDX1P47902 265 aaPredicted RBP3.88□□□□□ -1.79
VTI1B-202ENST00000553619 PPT1P50897 306 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 PLP1P60201 277 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 KRTAP10-11P60412 298 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 IFITM2Q01629 132 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 CFHR3Q02985 330 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 LBHQ53QV2 105 aaPredicted RBP3.88□□□□□ -1.79
VTI1B-202ENST00000553619 CLLU1Q5K131 121 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 MIC13Q5XKP0 118 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 ZNF343Q6P1L6 599 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 CLEC19AQ6UXS0 136 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 TMEM182Q6ZP80 229 aaPredicted RBP3.88□□□□□ -1.79
VTI1B-202ENST00000553619 KLHDC1Q8N7A1 406 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 ZNF491Q8N8L2 437 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 RNF152Q8N8N0 203 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 STXBP6Q8NFX7 210 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 ZNF502Q8TBZ5 544 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 MBD3L1Q8WWY6 194 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 MGST2Q99735 147 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 GGTLC1Q9BX51 225 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 MRPL32Q9BYC8 188 aaKnown RBP3.88□□□□□ -1.79
VTI1B-202ENST00000553619 KLK15Q9H2R5 256 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 ESM1Q9NQ30 184 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 SERTAD4Q9NUC0 356 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 TENM4Q6N022 2769 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 COL12A1Q99715 3063 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 NBPF19A0A087WUL8 3843 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 HECTD1Q9ULT8 2610 aa3.88□□□□□ -1.79
VTI1B-202ENST00000553619 PDZD2O15018 2839 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 A0A1W2PS18 150 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 OR2T8A6NH00 312 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 ZNF98A6NK75 572 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 PCP4L1A6NKN8 68 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 F8W036 122 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 NDUFA4O00483 81 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 TGOLN2O43493 480 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 COX7A2P2O60397 106 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 CIDEAO60543 219 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 OR2C1O95371 312 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 IFNA1P01562 189 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 IGHV3-48P01763 117 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 HSPB1P04792 205 aaKnown RBP3.87□□□□□ -1.79
VTI1B-202ENST00000553619 CTSGP08311 255 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 LINC00869P0C866 280 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 PSG1P11464 419 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 ZP3P21754 424 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 NPPCP23582 126 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 BMI1P35226 326 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 CDC34P49427 236 aaPredicted RBP3.87□□□□□ -1.79
VTI1B-202ENST00000553619 RUNX1Q01196 453 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 TIGITQ495A1 244 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 FAM78BQ5VT40 261 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 C10orf113Q5VZT2 155 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 PQLC2Q6ZP29 291 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 ZNF329Q86UD4 541 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 OR1B1Q8NGR6 318 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 LINC01006Q8NI28 216 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 FAM213BQ8TBF2 198 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 SFT2D1Q8WV19 159 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 DPF1Q92782 380 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms