RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 GABARAPL2P60520 117 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 DHODHQ02127 395 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 AARDQ4LEZ3 155 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 IDNKQ5T6J7 187 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 OR6F1Q8NGZ6 308 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 TMEM170AQ8WVE7 144 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 ATG101Q9BSB4 218 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 BLOC1S6Q9UL45 172 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 GOLT1BQ9Y3E0 138 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 PLAC8L1A1L4L8 177 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 F6UB75 175 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 M0QYG6 137 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 GSTZ1O43708 216 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-219ENST00000553488 TOMM40O96008 361 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 INAFM2P0DMQ5 153 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 HLA-DMAP28067 261 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 OR10J1P30954 320 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 ETV6P41212 452 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 HSPA13P48723 471 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 PSMB3P49720 205 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 RORCP51449 518 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 SUB1P53999 127 aaKnown RBP eCLIP5.05□□□□□ -1.6
ATXN3-219ENST00000553488 RND3P61587 244 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 RRN3P1Q2M238 152 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 LPCAT3Q6P1A2 487 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 AMTNQ6UX39 209 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 SPARTQ8N0X7 666 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 GPR146Q96CH1 333 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 TP53RKQ96S44 253 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 SCPEP1Q9HB40 452 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 SSR3Q9UNL2 185 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 PKHD1L1Q86WI1 4243 aa5.05□□□□□ -1.6
ATXN3-219ENST00000553488 A0A0J9YX75 114 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 RPS10-NUDT3A0A1W2PQS6 291 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 LYRM9A8MSI8 78 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 PRM2P04554 102 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 SLC25A4P12235 298 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 ELK1P19419 428 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 S100GP29377 79 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 AKR1C2P52895 323 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 XGP55808 180 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 PSG9Q00887 426 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 C2orf83Q53S99 150 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 UBE2NLQ5JXB2 153 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 TMEM69Q5SWH9 247 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 Q5VSD8 79 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 FAM78BQ5VT40 261 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 SPATA31B1PQ5VZV4 182 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 GSG1LQ6UXU4 331 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 LYPD1Q8N2G4 141 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 OR4B1Q8NGF8 309 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 GPX8Q8TED1 209 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 Q8WTZ3 238 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 FCGR1BQ92637 280 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 CNBD2Q96M20 576 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 C7orf50Q9BRJ6 194 aaKnown RBP5.04□□□□□ -1.6
ATXN3-219ENST00000553488 PDCD10Q9BUL8 212 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 Q9H3A6 140 aa5.04□□□□□ -1.6
ATXN3-219ENST00000553488 CRXO43186 299 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-219ENST00000553488 PSG1P11464 419 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 TSPOP30536 169 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 TGFBR1P36897 503 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 HTR2BP41595 481 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 CCL18P55774 89 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 TSPAN5P62079 268 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 TTC32Q5I0X7 151 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 IZUMO2Q6UXV1 221 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 Q6ZRN7 208 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-219ENST00000553488 SSX7Q7RTT5 188 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 LHFPL1Q86WI0 220 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 SLC24A4Q8NFF2 622 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 OR51G1Q8NGK1 321 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 RNASEH2CQ8TDP1 164 aaKnown RBP5.03□□□□□ -1.6
ATXN3-219ENST00000553488 S100A16Q96FQ6 103 aaKnown RBP5.03□□□□□ -1.6
ATXN3-219ENST00000553488 ZNF486Q96H40 463 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-219ENST00000553488 IGF2BP2-AS1Q96M15 143 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 C17orf77Q96MU5 243 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 LINC00052Q96N35 136 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 ENY2Q9NPA8 101 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 KLK11Q9UBX7 282 aa5.03□□□□□ -1.6
ATXN3-219ENST00000553488 IGKV1D-37A0A075B6S9 117 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 LOC100506127A0A0U1RQW1 187 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 ZNF705GA8MUZ8 300 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-219ENST00000553488 F5H768 121 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 ISLRO14498 428 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 RD3LP0DJH9 198 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 DEFB130BP0DP73 79 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 DEFB130AP0DP74 79 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 UCP1P25874 307 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 PRSS3P35030 304 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 RCVRNP35243 200 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 NUP62P37198 522 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-219ENST00000553488 PIGPP57054 158 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 SPCS3P61009 180 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 SUPT4H1P63272 117 aaKnown RBP5.02□□□□□ -1.61
ATXN3-219ENST00000553488 OR8G2PQ6IF36 304 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 SAMD12Q8N8I0 201 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 OR52E5Q8NH55 327 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 COQ8AQ8NI60 647 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 LHFPL5Q8TAF8 219 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms