RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 CHEK1O14757 476 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 GHRHP01286 108 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 IGLV1-47P01700 117 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 THBDP07204 575 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 PYYP10082 97 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 MYOD1P15172 320 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 CCL3L1P16619 93 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 WT1P19544 449 aaPredicted RBP4.3□□□□□ -1.72
CCNT1-204ENST00000551989 NTF3P20783 257 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 GATA2P23769 480 aaPredicted RBP4.3□□□□□ -1.72
CCNT1-204ENST00000551989 TSPOP30536 169 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 APOBEC3AP31941 199 aaPredicted RBP4.3□□□□□ -1.72
CCNT1-204ENST00000551989 TCL1AP56279 114 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 CCL8P80075 99 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 FAM27E3Q08E93 113 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 TNXAQ16473 311 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 DUX4L9Q6RFH8 374 aaPredicted RBP4.3□□□□□ -1.72
CCNT1-204ENST00000551989 MOB3BQ86TA1 216 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 PPP1R27Q86WC6 154 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 BPIFA4PQ86YQ2 179 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 CIARTQ8N365 385 aaPredicted RBP4.3□□□□□ -1.72
CCNT1-204ENST00000551989 ZNF738Q8NE65 137 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 OR4F17Q8NGA8 305 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 OR1B1Q8NGR6 318 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 OR2T6Q8NHC8 308 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 H1FXQ92522 213 aaKnown RBP4.3□□□□□ -1.72
CCNT1-204ENST00000551989 RCHY1Q96PM5 261 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 RASL11BQ9BPW5 248 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 Q9H3A6 140 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 RALYQ9UKM9 306 aaKnown RBP4.3□□□□□ -1.72
CCNT1-204ENST00000551989 SIGLEC9Q9Y336 463 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 MALRD1Q5VYJ5 2156 aa4.3□□□□□ -1.72
CCNT1-204ENST00000551989 FAM186AA6NE01 2351 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 SPTBN5Q9NRC6 3674 aaKnown RBP4.29□□□□□ -1.72
CCNT1-204ENST00000551989 LOC102724200A0A096LPH7 203 aaPredicted RBP4.29□□□□□ -1.72
CCNT1-204ENST00000551989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.29□□□□□ -1.72
CCNT1-204ENST00000551989 TRAV5A0A0B4J249 113 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 IGHV1-3A0A0C4DH29 117 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 SPAARA0A1B0GVQ0 90 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 C2orf70A6NJV1 201 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 OOSP1A8MZH6 123 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 H3BRN7 92 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 K7EM74 188 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 LEPROTL1O95214 131 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 MOSP00540 346 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 IGLC1P0CG04 106 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 PLA2G5P39877 138 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 CEACAM3P40198 252 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 CSN1S1P47710 185 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 RAB9AP51151 201 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 SRSF2Q01130 221 aaKnown RBP4.29□□□□□ -1.72
CCNT1-204ENST00000551989 BSPH1Q075Z2 132 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 KIAA1644Q3SXP7 199 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 UTF1Q5T230 341 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 MORN5Q5VZ52 161 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 RNASEKQ6P5S7 137 aaKnown RBP4.29□□□□□ -1.72
CCNT1-204ENST00000551989 CLEC2AQ6UVW9 174 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 C12orf54Q6X4T0 127 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 COX8CQ7Z4L0 72 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 SPATA12Q7Z6I5 190 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 MUC15Q8N387 334 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 RPEQ96AT9 228 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 FAM122AQ96E09 287 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 SHANK2-AS3Q9BTD1 123 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 MAP1LC3CQ9BXW4 147 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 NPFFR1Q9GZQ6 430 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 CTSZQ9UBR2 303 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 RNF114Q9Y508 228 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 INSIG2Q9Y5U4 225 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 ZDBF2Q9HCK1 2354 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 ARFGEF3Q5TH69 2177 aa4.29□□□□□ -1.72
CCNT1-204ENST00000551989 TRAV34A0A0B4J273 112 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 A0A0G2JNJ9 132 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 A0A1B0GUT8 65 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 OR4C46A6NHA9 309 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 TEX22C9J3V5 150 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 E7EUB6 86 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 BUB1B-PAK6H3BSN5 160 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 SYS1-DBNDD2H3BUS1 97 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 I3L2K1 104 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 SPINK4O60575 86 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 NDUFA3O95167 84 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 CD3EP07766 207 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 CT45A10P0DMU9 189 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 ORM2P19652 201 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 SLC35B1P78383 322 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 PSG9Q00887 426 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 SRSF6Q13247 344 aaKnown RBP4.28□□□□□ -1.72
CCNT1-204ENST00000551989 MLANAQ16655 118 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 MRGPRG-AS1Q2M3A8 158 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 FBXL19-AS1Q494R0 122 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 SAPCD1Q5SSQ6 148 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 PRR27Q6MZM9 219 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 CCDC144NLQ6NUI1 221 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 ZNF493Q6ZR52 646 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 C11orf42Q8N5U0 333 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 RNF152Q8N8N0 203 aa4.28□□□□□ -1.72
CCNT1-204ENST00000551989 SRSF12Q8WXF0 261 aaKnown RBP4.28□□□□□ -1.72
CCNT1-204ENST00000551989 CCL17Q92583 94 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms