RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 M0R2P5 195 aa10.34□□□□□ -0.75
RAB3IP-212ENST00000550536 SLC25A48Q6ZT89 311 aaKnown RBP10.34□□□□□ -0.75
RAB3IP-212ENST00000550536 CST9LQ9H4G1 147 aa10.34□□□□□ -0.75
RAB3IP-212ENST00000550536 IGKV1-9A0A0C4DH69 117 aa10.34□□□□□ -0.75
RAB3IP-212ENST00000550536 SAP30O75446 220 aa10.34□□□□□ -0.75
RAB3IP-212ENST00000550536 BTCP35070 178 aa10.34□□□□□ -0.75
RAB3IP-212ENST00000550536 SPSB3Q6PJ21 355 aa10.34□□□□□ -0.75
RAB3IP-212ENST00000550536 TRAV9-2A0A087WT02 112 aa10.34□□□□□ -0.75
RAB3IP-212ENST00000550536 TMEM238C9JI98 176 aa10.34□□□□□ -0.75
RAB3IP-212ENST00000550536 F8VVB4 439 aa10.34□□□□□ -0.75
RAB3IP-212ENST00000550536 F8VWA3 439 aa10.34□□□□□ -0.75
RAB3IP-212ENST00000550536 A0A0A6YYD4 124 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 SLC25A39Q9BZJ4 359 aaPredicted RBP10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 ZCCHC24Q8N2G6 241 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 PCP4P48539 62 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 RPL15P61313 204 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 MINOS1Q5TGZ0 78 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 TMEM200BQ69YZ2 307 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 GGNQ86UU5 652 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 MINOS1-NBL1R4GNA1 71 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 TMEM219Q86XT9 240 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 FLVCR1-AS1Q8TAF5 88 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 OTOGLQ3ZCN5 2332 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 C1QTNF9P0C862 333 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 RASL11AQ6T310 242 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 WDR87Q6ZQQ6 2873 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 GFI1BQ5VTD9 330 aa10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 FNDC4Q9H6D8 234 aaPredicted RBP10.33□□□□□ -0.76
RAB3IP-212ENST00000550536 FOXF2Q12947 444 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 TRGV9Q99603 122 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 H3BUT2 72 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 IGHV1-8P0DP01 117 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 NPIPB5A8MRT5 1133 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 HIST1H2BKO60814 126 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 HIST1H2BJP06899 126 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 HIST1H2BOP23527 126 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 HIST1H2BBP33778 126 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 HIST1H2BDP58876 126 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 HIST1H2BCP62807 126 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 SRSF6Q13247 344 aaKnown RBP10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 HIST2H2BEQ16778 126 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 HIST1H2BHQ93079 126 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 HIST1H2BNQ99877 126 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 HIST1H2BMQ99879 126 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 CDK2AP2O75956 126 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 LAMTOR2Q9Y2Q5 125 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 IGKV2-40A0A087WW87 121 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 IGKV2D-40P01614 121 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 PMS2P5A8MQ11 134 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 TFF1P04155 84 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 TMEM242Q9NWH2 141 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 IGHV3-64A0A075B6Q5 118 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 LYNX1G3V0Z9 82 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 TBX6O95947 436 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 LYNX1P0DP58 116 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 TDGF1P3P51864 188 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 MGST2Q99735 147 aa10.32□□□□□ -0.76
RAB3IP-212ENST00000550536 TRAV8-4A0A0B4J246 113 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 TMEM178BH3BS89 294 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 SRRM5B3KS81 715 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 RCHY1Q96PM5 261 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 SMPXQ9UHP9 88 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 VWCEQ96DN2 955 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 PRR32B1ATL7 298 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 SFTA2Q6UW10 78 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 LINC00587B1AMM8 73 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 M0R1W7 72 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 EXOC3-AS1Q8N2X6 119 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 OCC1Q8TAD7 63 aa10.31□□□□□ -0.76
RAB3IP-212ENST00000550536 IGHV1-3A0A0C4DH29 117 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 LINC00158P58513 81 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 HEPN1Q6WQI6 88 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 USMG5Q96IX5 58 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 PINLYPA6NC86 204 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 FAM223BA6NKX1 122 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 FAM223AQ8IWN6 122 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 MS4A6AQ9H2W1 248 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 PLSCR4Q9NRQ2 329 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 EFNA4P52798 201 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 TEX38Q6PEX7 206 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 IFI27L1Q96BM0 104 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 ZNF672Q499Z4 452 aaPredicted RBP10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 LY6G6FQ5SQ64 297 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 TREML4Q6UXN2 200 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 JPT2Q9H910 190 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 A0A087WX48 190 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 NTN3O00634 580 aaPredicted RBP10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 ATXN8Q156A1 80 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 CD33P20138 364 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 PPIFP30405 207 aaKnown RBP10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 C11orf44Q8N8P7 122 aa10.3□□□□□ -0.76
RAB3IP-212ENST00000550536 SRRM4A7MD48 611 aaKnown RBP10.29□□□□□ -0.76
RAB3IP-212ENST00000550536 MLNRO43193 412 aa10.29□□□□□ -0.76
RAB3IP-212ENST00000550536 GZMBP10144 247 aa10.29□□□□□ -0.76
RAB3IP-212ENST00000550536 SRSF3P84103 164 aaKnown RBP10.29□□□□□ -0.76
RAB3IP-212ENST00000550536 SSC4DQ8WTU2 575 aa10.29□□□□□ -0.76
RAB3IP-212ENST00000550536 WFDC12Q8WWY7 111 aa10.29□□□□□ -0.76
RAB3IP-212ENST00000550536 CSPG4Q6UVK1 2322 aa10.29□□□□□ -0.76
RAB3IP-212ENST00000550536 INSP01308 110 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms