RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 RBMY1A1P0DJD3 496 aaKnown RBP13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 RBMY1CP0DJD4 496 aa13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 ANXA7P20073 488 aaKnown RBP13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 PSMB3P49720 205 aa13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 RBMY1FQ15415 496 aaKnown RBP13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 SAMD13Q5VXD3 122 aa13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 TMEM144Q7Z5S9 345 aa13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 BPIFCQ8NFQ6 507 aa13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 SMIM8Q96KF7 97 aa13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 CLUHP3Q96NS8 147 aa13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 CLEC5AQ9NY25 188 aa13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 TBC1D24Q9ULP9 559 aa13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 ISLRO14498 428 aa13.51□□□□□ -0.25
CHMP1A-207ENST00000549328 SOCS3O14543 225 aa13.51□□□□□ -0.25
CHMP1A-207ENST00000549328 S100A7P31151 101 aa13.51□□□□□ -0.25
CHMP1A-207ENST00000549328 AKR1C1Q04828 323 aa13.51□□□□□ -0.25
CHMP1A-207ENST00000549328 ACOT7LQ6ZUV0 252 aa13.51□□□□□ -0.25
CHMP1A-207ENST00000549328 PSENENQ9NZ42 101 aa13.51□□□□□ -0.25
CHMP1A-207ENST00000549328 C11orf94C9JXX5 98 aa13.5□□□□□ -0.25
CHMP1A-207ENST00000549328 MEOX2P50222 304 aa13.5□□□□□ -0.25
CHMP1A-207ENST00000549328 TCTAP57738 103 aa13.5□□□□□ -0.25
CHMP1A-207ENST00000549328 SPATA31B1PQ5VZV4 182 aa13.5□□□□□ -0.25
CHMP1A-207ENST00000549328 FOXI2Q6ZQN5 318 aa13.5□□□□□ -0.25
CHMP1A-207ENST00000549328 MITD1Q8WV92 249 aa13.5□□□□□ -0.25
CHMP1A-207ENST00000549328 LINC00052Q96N35 136 aa13.5□□□□□ -0.25
CHMP1A-207ENST00000549328 SAV1Q9H4B6 383 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-207ENST00000549328 XCL2Q9UBD3 114 aa13.5□□□□□ -0.25
CHMP1A-207ENST00000549328 ZNF98A6NK75 572 aa13.49□□□□□ -0.25
CHMP1A-207ENST00000549328 PMS2P5A8MQ11 134 aa13.49□□□□□ -0.25
CHMP1A-207ENST00000549328 PLA2G10O15496 165 aa13.49□□□□□ -0.25
CHMP1A-207ENST00000549328 GALR1P47211 349 aa13.49□□□□□ -0.25
CHMP1A-207ENST00000549328 TAS2R30P59541 319 aa13.49□□□□□ -0.25
CHMP1A-207ENST00000549328 IAH1Q2TAA2 248 aaPredicted RBP13.49□□□□□ -0.25
CHMP1A-207ENST00000549328 LGALS9CQ6DKI2 356 aa13.49□□□□□ -0.25
CHMP1A-207ENST00000549328 C2CD4CQ8TF44 421 aa13.49□□□□□ -0.25
CHMP1A-207ENST00000549328 GPR82Q96P67 336 aa13.49□□□□□ -0.25
CHMP1A-207ENST00000549328 ALMS1Q8TCU4 4167 aa13.49□□□□□ -0.25
CHMP1A-207ENST00000549328 FNDC10F2Z333 226 aa13.48□□□□□ -0.25
CHMP1A-207ENST00000549328 SSSCA1O60232 199 aa13.48□□□□□ -0.25
CHMP1A-207ENST00000549328 ORM2P19652 201 aa13.48□□□□□ -0.25
CHMP1A-207ENST00000549328 GATA2P23769 480 aaPredicted RBP13.48□□□□□ -0.25
CHMP1A-207ENST00000549328 PAX9P55771 341 aa13.48□□□□□ -0.25
CHMP1A-207ENST00000549328 GDF5OSQ5U4N7 250 aa13.48□□□□□ -0.25
CHMP1A-207ENST00000549328 TMEM182Q6ZP80 229 aaPredicted RBP13.48□□□□□ -0.25
CHMP1A-207ENST00000549328 TMEM147Q9BVK8 224 aa13.48□□□□□ -0.25
CHMP1A-207ENST00000549328 HYDINQ4G0P3 5121 aa13.47□□□□□ -0.25
CHMP1A-207ENST00000549328 LYRM1O43325 122 aa13.47□□□□□ -0.25
CHMP1A-207ENST00000549328 SELENOTP62341 195 aa13.47□□□□□ -0.25
CHMP1A-207ENST00000549328 DLK1P80370 383 aa13.47□□□□□ -0.25
CHMP1A-207ENST00000549328 TMEM14EPQ6UXP3 125 aa13.47□□□□□ -0.25
CHMP1A-207ENST00000549328 ZBTB8BQ8NAP8 495 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-207ENST00000549328 OR1B1Q8NGR6 318 aa13.47□□□□□ -0.25
CHMP1A-207ENST00000549328 C20orf85Q9H1P6 137 aa13.47□□□□□ -0.25
CHMP1A-207ENST00000549328 SLC25A32Q9H2D1 315 aa13.47□□□□□ -0.25
CHMP1A-207ENST00000549328 SLC25A22Q9H936 323 aa13.47□□□□□ -0.25
CHMP1A-207ENST00000549328 ELOA3CA0A087WX78 387 aaPredicted RBP13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 SMCO3A2RU48 225 aa13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 TSC22D2O75157 780 aa13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 IL5P05113 134 aa13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 HLA-DMBP28068 263 aa13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 ZNF705AQ6ZN79 300 aaPredicted RBP13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 CYP2G1PQ6ZSU1 146 aa13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 OR10P1Q8NGE3 313 aa13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 NEU1Q99519 415 aa13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 RSG1Q9BU20 258 aa13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 NPVFQ9HCQ7 196 aa13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 RPRMQ9NS64 109 aa13.46□□□□□ -0.25
CHMP1A-207ENST00000549328 TCRBP04435 133 aa13.45□□□□□ -0.26
CHMP1A-207ENST00000549328 DEFB1P60022 68 aa13.45□□□□□ -0.26
CHMP1A-207ENST00000549328 PLP1P60201 277 aa13.45□□□□□ -0.26
CHMP1A-207ENST00000549328 EBLN2Q6P2I7 272 aa13.45□□□□□ -0.26
CHMP1A-207ENST00000549328 LINC00299Q6ZSB3 139 aa13.45□□□□□ -0.26
CHMP1A-207ENST00000549328 C16orf92Q96LL3 132 aa13.45□□□□□ -0.26
CHMP1A-207ENST00000549328 GSKIPQ9P0R6 139 aa13.45□□□□□ -0.26
CHMP1A-207ENST00000549328 A0A0J9YX75 114 aa13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 SMIM9A6NGZ8 99 aa13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 ZNF705FA8MVS1 300 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 K7EPK0 472 aa13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 SCGB1D2O95969 90 aa13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 IGKV3-20P01619 116 aa13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 METTL15P1P0C7V9 234 aa13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 ZNF705DP0CH99 300 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 ZNF705BP0CI00 300 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 RAP2BP61225 183 aa13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 S100A7AQ86SG5 101 aa13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 OR4B1Q8NGF8 309 aa13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 C17orf77Q96MU5 243 aa13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 CCDC32Q9BV29 185 aa13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 SLC25A39Q9BZJ4 359 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 RCL1Q9Y2P8 373 aaKnown RBP13.44□□□□□ -0.26
CHMP1A-207ENST00000549328 TRAV10A0A0B4J240 114 aa13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 H3BRN7 92 aa13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 HYPMO75409 117 aa13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 CCNKO75909 580 aa13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 MBPP02686 304 aaPredicted RBP13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 PSG9Q00887 426 aa13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 FAM78BQ5VT40 261 aa13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 TEPPQ6URK8 271 aa13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.43□□□□□ -0.26
CHMP1A-207ENST00000549328 ZNF709Q8N972 641 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms