RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 C14orf178Q8N769 122 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-204ENST00000544246 VSIRQ9H7M9 311 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 ZNF319Q9P2F9 582 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 PSME4Q14997 1843 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 WFDC1Q9HC57 220 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 MPV17L2Q567V2 206 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 C5orf47Q569G3 176 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 UBE2E2Q96LR5 201 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 CLPSL1A2RUU4 121 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 FCN3O75636 299 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 CGB3P0DN86 165 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 ZDBF2Q9HCK1 2354 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 F8VVB4 439 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 F8VWA3 439 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 SYS1-DBNDD2H3BUS1 97 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 TRPT1Q86TN4 253 aaKnown RBP8.56□□□□□ -1.04
PCDH9-204ENST00000544246 C9orf106Q8NAJ2 232 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 WDR83OSQ9Y284 106 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 IGKV1D-43A0A0B4J1Z2 117 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 GREM1O60565 184 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 CTSBP07858 339 aa8.56□□□□□ -1.04
PCDH9-204ENST00000544246 CRLF1O75462 422 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 PRR31Q5SQ13 230 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 BMPERQ8N8U9 685 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 A0A1B0GTI1 187 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 GAGE12BA1L429 117 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 CHKB-CPT1BH3BT56 60 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 CXCL1P09341 107 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 SPATA31B1PQ5VZV4 182 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 TRBV24-1A0A075B6N3 115 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 IFITM1P13164 125 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 MPZP25189 248 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 TREML4Q6UXN2 200 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 NUP35Q8NFH5 326 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 MRPS18CQ9Y3D5 142 aaKnown RBP8.55□□□□□ -1.04
PCDH9-204ENST00000544246 BRCA1P38398 1863 aaKnown RBP8.55□□□□□ -1.04
PCDH9-204ENST00000544246 LCNL1Q6ZST4 164 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 TRGV9Q99603 122 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 A0A087WWL8 130 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 IGHV2-26A0A0B4J1V2 119 aa8.55□□□□□ -1.04
PCDH9-204ENST00000544246 A0A1B0GWJ7 208 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 hADV29S1A0JD25 119 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 TIAF1O95411 115 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 CACNA1GO43497 2377 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 LCN12Q6JVE5 192 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 NABP1Q96AH0 204 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 FAM223BA6NKX1 122 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 TFF1P04155 84 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 SUPT4H1P63272 117 aaKnown RBP8.54□□□□□ -1.04
PCDH9-204ENST00000544246 NDPQ00604 133 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 ZC2HC1BQ5TFG8 222 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 FAM223AQ8IWN6 122 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 MRPL27Q9P0M9 148 aaKnown RBP8.54□□□□□ -1.04
PCDH9-204ENST00000544246 DEFB130BP0DP73 79 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 DEFB130AP0DP74 79 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 TAL2Q16559 108 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 TMEM141Q96I45 108 aa8.54□□□□□ -1.04
PCDH9-204ENST00000544246 TRBV20-1A0A075B6N2 111 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 C3orf79P0CE67 100 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 CGB7P0DN87 165 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 TMEM219Q86XT9 240 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 TET1Q8NFU7 2136 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 LYNX1G3V0Z9 82 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 FGF16O43320 207 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 LYNX1P0DP58 116 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 WBP1Q96G27 269 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 SCRT2Q9NQ03 307 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 PARP14Q460N5 1801 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 IL18BPO95998 194 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 TDRD15B5MCY1 1934 aaKnown RBP8.53□□□□□ -1.04
PCDH9-204ENST00000544246 KLF5Q13887 457 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-204ENST00000544246 LIME1Q9H400 295 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 TRBV25-1A0A075B6N4 114 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 MINOS1Q5TGZ0 78 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 PIP4P2Q8N4L2 257 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 USMG5Q96IX5 58 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 SMIM2Q9BVW6 85 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 MINOS1-NBL1R4GNA1 71 aa8.53□□□□□ -1.04
PCDH9-204ENST00000544246 SMKR1H3BMG3 65 aa8.52□□□□□ -1.04
PCDH9-204ENST00000544246 IGHG4P01861 327 aa8.52□□□□□ -1.04
PCDH9-204ENST00000544246 ID3Q02535 119 aa8.52□□□□□ -1.04
PCDH9-204ENST00000544246 KLHL30-AS1Q8NEE0 82 aa8.52□□□□□ -1.04
PCDH9-204ENST00000544246 Q8TAT8 98 aa8.52□□□□□ -1.04
PCDH9-204ENST00000544246 RMI2Q96E14 147 aa8.52□□□□□ -1.04
PCDH9-204ENST00000544246 TCF20Q9UGU0 1960 aaKnown RBP8.52□□□□□ -1.04
PCDH9-204ENST00000544246 A0A1B0GW64 132 aa8.52□□□□□ -1.05
PCDH9-204ENST00000544246 PFN2P35080 140 aa8.52□□□□□ -1.05
PCDH9-204ENST00000544246 RBM3P98179 157 aaKnown RBP8.52□□□□□ -1.05
PCDH9-204ENST00000544246 LY96Q9Y6Y9 160 aa8.52□□□□□ -1.05
PCDH9-204ENST00000544246 IGHV1-18A0A0C4DH31 117 aa8.52□□□□□ -1.05
PCDH9-204ENST00000544246 RNF5Q99942 180 aa8.52□□□□□ -1.05
PCDH9-204ENST00000544246 FBLN5Q9UBX5 448 aa8.52□□□□□ -1.05
PCDH9-204ENST00000544246 SPAG17Q6Q759 2223 aa8.52□□□□□ -1.05
PCDH9-204ENST00000544246 IGHV1-3A0A0C4DH29 117 aa8.52□□□□□ -1.05
PCDH9-204ENST00000544246 ZNF362Q5T0B9 420 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-204ENST00000544246 PPDPFLQ8WWR9 84 aa8.52□□□□□ -1.05
PCDH9-204ENST00000544246 RNF114Q9Y508 228 aa8.52□□□□□ -1.05
PCDH9-204ENST00000544246 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-204ENST00000544246 SPANXCQ9NY87 97 aa8.52□□□□□ -1.05
PCDH9-204ENST00000544246 MAP1BP46821 2468 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms