RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CCDC140Q96MF4 163 aa15.43■□□□□ 0.06
COPS7A-218ENST00000543939 NOL4LQ96MY1 436 aaPredicted RBP15.43■□□□□ 0.06
COPS7A-218ENST00000543939 SHANK2-AS3Q9BTD1 123 aa15.43■□□□□ 0.06
COPS7A-218ENST00000543939 FAM223BA6NKX1 122 aa15.43■□□□□ 0.06
COPS7A-218ENST00000543939 B4DEV8 164 aa15.43■□□□□ 0.06
COPS7A-218ENST00000543939 GGTLC3B5MD39 225 aa15.43■□□□□ 0.06
COPS7A-218ENST00000543939 H3BRN7 92 aa15.43■□□□□ 0.06
COPS7A-218ENST00000543939 LEMD1Q68G75 181 aa15.43■□□□□ 0.06
COPS7A-218ENST00000543939 ZNF343Q6P1L6 599 aa15.43■□□□□ 0.06
COPS7A-218ENST00000543939 FAM223AQ8IWN6 122 aa15.43■□□□□ 0.06
COPS7A-218ENST00000543939 GAR1Q9NY12 217 aaKnown RBP15.43■□□□□ 0.06
COPS7A-218ENST00000543939 ZNF580Q9UK33 172 aa15.43■□□□□ 0.06
COPS7A-218ENST00000543939 VPREB3Q9UKI3 123 aa15.43■□□□□ 0.06
COPS7A-218ENST00000543939 A0A087WWC5 75 aa15.42■□□□□ 0.06
COPS7A-218ENST00000543939 TRBV7-1A0A0A6YYK4 115 aa15.42■□□□□ 0.06
COPS7A-218ENST00000543939 H3BUA1 57 aa15.42■□□□□ 0.06
COPS7A-218ENST00000543939 GPR183P32249 361 aa15.42■□□□□ 0.06
COPS7A-218ENST00000543939 ATP5G2Q06055 141 aa15.42■□□□□ 0.06
COPS7A-218ENST00000543939 USF2Q15853 346 aaPredicted RBP15.42■□□□□ 0.06
COPS7A-218ENST00000543939 ZNF414Q96IQ9 312 aa15.42■□□□□ 0.06
COPS7A-218ENST00000543939 DERL1Q9BUN8 251 aa15.42■□□□□ 0.06
COPS7A-218ENST00000543939 TMEM14CQ9P0S9 112 aa15.42■□□□□ 0.06
COPS7A-218ENST00000543939 UNC79Q9P2D8 2635 aa15.42■□□□□ 0.06
COPS7A-218ENST00000543939 CLEC3BP05452 202 aa15.41■□□□□ 0.06
COPS7A-218ENST00000543939 ATP6V0BQ99437 205 aa15.41■□□□□ 0.06
COPS7A-218ENST00000543939 TUBA4BQ9H853 241 aa15.41■□□□□ 0.06
COPS7A-218ENST00000543939 CCDC168Q8NDH2 2452 aa15.41■□□□□ 0.06
COPS7A-218ENST00000543939 TRGV3P03979 118 aa15.4■□□□□ 0.06
COPS7A-218ENST00000543939 RPL23P62829 140 aaKnown RBP15.4■□□□□ 0.06
COPS7A-218ENST00000543939 SUMO1P63165 101 aaKnown RBP15.4■□□□□ 0.06
COPS7A-218ENST00000543939 TEX29Q8N6K0 151 aa15.4■□□□□ 0.06
COPS7A-218ENST00000543939 TMA7Q9Y2S6 64 aaKnown RBP15.4■□□□□ 0.06
COPS7A-218ENST00000543939 ITPR2Q14571 2701 aa15.4■□□□□ 0.06
COPS7A-218ENST00000543939 NBEAP1P0C6P0 100 aa15.4■□□□□ 0.06
COPS7A-218ENST00000543939 CFHR3Q02985 330 aa15.4■□□□□ 0.06
COPS7A-218ENST00000543939 KRTAP1-1Q07627 177 aa15.4■□□□□ 0.06
COPS7A-218ENST00000543939 CLEC19AQ6UXS0 136 aa15.4■□□□□ 0.06
COPS7A-218ENST00000543939 ZNF600Q6ZNG1 722 aa15.4■□□□□ 0.06
COPS7A-218ENST00000543939 ADIRFQ15847 76 aa15.39■□□□□ 0.05
COPS7A-218ENST00000543939 S100A7AQ86SG5 101 aa15.39■□□□□ 0.05
COPS7A-218ENST00000543939 ELOVL1Q9BW60 279 aa15.39■□□□□ 0.05
COPS7A-218ENST00000543939 TSPAN4O14817 238 aa15.38■□□□□ 0.05
COPS7A-218ENST00000543939 HOXA3O43365 443 aaPredicted RBP15.38■□□□□ 0.05
COPS7A-218ENST00000543939 IGLV1-40P01703 118 aa15.38■□□□□ 0.05
COPS7A-218ENST00000543939 CRYBB3P26998 211 aa15.38■□□□□ 0.05
COPS7A-218ENST00000543939 MYCNOSP40205 109 aa15.38■□□□□ 0.05
COPS7A-218ENST00000543939 ZNF98A6NK75 572 aa15.37■□□□□ 0.05
COPS7A-218ENST00000543939 TGOLN2O43493 480 aa15.37■□□□□ 0.05
COPS7A-218ENST00000543939 SNRPCP09234 159 aaKnown RBP15.37■□□□□ 0.05
COPS7A-218ENST00000543939 TPPP2P59282 170 aa15.37■□□□□ 0.05
COPS7A-218ENST00000543939 ZNF329Q86UD4 541 aa15.37■□□□□ 0.05
COPS7A-218ENST00000543939 BLNKQ8WV28 456 aa15.37■□□□□ 0.05
COPS7A-218ENST00000543939 TRBV20OR9-2A0A075B6H5 130 aa15.37■□□□□ 0.05
COPS7A-218ENST00000543939 HIST1H1EP10412 219 aaKnown RBP15.37■□□□□ 0.05
COPS7A-218ENST00000543939 IL17RELQ6ZVW7 336 aa15.37■□□□□ 0.05
COPS7A-218ENST00000543939 C2CD4CQ8TF44 421 aa15.37■□□□□ 0.05
COPS7A-218ENST00000543939 USMG5Q96IX5 58 aa15.37■□□□□ 0.05
COPS7A-218ENST00000543939 ZNF469Q96JG9 3925 aaPredicted RBP15.36■□□□□ 0.05
COPS7A-218ENST00000543939 COLCA2A8K830 154 aa15.36■□□□□ 0.05
COPS7A-218ENST00000543939 MRPS12O15235 138 aaKnown RBP15.36■□□□□ 0.05
COPS7A-218ENST00000543939 CD5LO43866 347 aa15.36■□□□□ 0.05
COPS7A-218ENST00000543939 TMEM95Q3KNT9 176 aa15.36■□□□□ 0.05
COPS7A-218ENST00000543939 TOMM20LQ6UXN7 152 aa15.36■□□□□ 0.05
COPS7A-218ENST00000543939 BPIFA4PQ86YQ2 179 aa15.36■□□□□ 0.05
COPS7A-218ENST00000543939 C15orf54Q8N8G6 183 aa15.36■□□□□ 0.05
COPS7A-218ENST00000543939 ISOC2Q96AB3 205 aa15.36■□□□□ 0.05
COPS7A-218ENST00000543939 KLK15Q9H2R5 256 aa15.36■□□□□ 0.05
COPS7A-218ENST00000543939 ZFAND3Q9H8U3 227 aa15.36■□□□□ 0.05
COPS7A-218ENST00000543939 ZNF586Q9NXT0 402 aa15.36■□□□□ 0.05
COPS7A-218ENST00000543939 FLNAP21333 2647 aaKnown RBP15.35■□□□□ 0.05
COPS7A-218ENST00000543939 RPL35P42766 123 aaKnown RBP15.35■□□□□ 0.05
COPS7A-218ENST00000543939 RANP62826 216 aaKnown RBP15.35■□□□□ 0.05
COPS7A-218ENST00000543939 LINC01551Q86U37 167 aa15.35■□□□□ 0.05
COPS7A-218ENST00000543939 SIGLECL1Q8N7X8 197 aa15.35■□□□□ 0.05
COPS7A-218ENST00000543939 RABAC1Q9UI14 185 aa15.35■□□□□ 0.05
COPS7A-218ENST00000543939 IGHV3-35A0A0C4DH35 117 aa15.34■□□□□ 0.05
COPS7A-218ENST00000543939 C9JCJ5 164 aa15.34■□□□□ 0.05
COPS7A-218ENST00000543939 BMPR1BO00238 502 aa15.34■□□□□ 0.05
COPS7A-218ENST00000543939 PF4V1P10720 104 aa15.34■□□□□ 0.05
COPS7A-218ENST00000543939 RNF212Q495C1 297 aa15.34■□□□□ 0.05
COPS7A-218ENST00000543939 TCEAL7Q9BRU2 100 aa15.34■□□□□ 0.05
COPS7A-218ENST00000543939 PRSS22Q9GZN4 317 aa15.34■□□□□ 0.05
COPS7A-218ENST00000543939 GNB4Q9HAV0 340 aa15.34■□□□□ 0.05
COPS7A-218ENST00000543939 TMEM242Q9NWH2 141 aa15.34■□□□□ 0.05
COPS7A-218ENST00000543939 IGLC2P0DOY2 106 aa15.34■□□□□ 0.05
COPS7A-218ENST00000543939 YPEL4Q96NS1 127 aa15.34■□□□□ 0.05
COPS7A-218ENST00000543939 CXorf65A6NEN9 183 aa15.33■□□□□ 0.04
COPS7A-218ENST00000543939 HELTA6NFD8 242 aa15.33■□□□□ 0.04
COPS7A-218ENST00000543939 PGPEP1LA6NFU8 196 aa15.33■□□□□ 0.04
COPS7A-218ENST00000543939 H3BTX0 84 aa15.33■□□□□ 0.04
COPS7A-218ENST00000543939 RELQ04864 619 aaPredicted RBP15.33■□□□□ 0.04
COPS7A-218ENST00000543939 OR4F17Q8NGA8 305 aa15.33■□□□□ 0.04
COPS7A-218ENST00000543939 NPFFR1Q9GZQ6 430 aa15.33■□□□□ 0.04
COPS7A-218ENST00000543939 CTDSP1Q9GZU7 261 aa15.33■□□□□ 0.04
COPS7A-218ENST00000543939 ZNF702PQ9H963 129 aa15.33■□□□□ 0.04
COPS7A-218ENST00000543939 RNF24Q9Y225 148 aa15.33■□□□□ 0.04
COPS7A-218ENST00000543939 PRELID1Q9Y255 219 aa15.33■□□□□ 0.04
COPS7A-218ENST00000543939 MXRA5Q9NR99 2828 aa15.33■□□□□ 0.04
COPS7A-218ENST00000543939 PGPA6NDG6 321 aa15.32■□□□□ 0.04
COPS7A-218ENST00000543939 PPP5D1E7EU14 171 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms