RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 RBM14Q96PK6 669 aaKnown RBP14.08□□□□□ -0.16
PTPN6-222ENST00000543744 GNB4Q9HAV0 340 aa14.08□□□□□ -0.16
PTPN6-222ENST00000543744 F2Z2F3 143 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 KIAA1644Q3SXP7 199 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 KIR3DL3Q8N743 410 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 TMEM68Q96MH6 324 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 NOL4LQ96MY1 436 aaPredicted RBP14.07□□□□□ -0.16
PTPN6-222ENST00000543744 ARHGAP32A7KAX9 2087 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 A0A1W2PPR1 153 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 PAX1P15863 534 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 FBLN7Q53RD9 439 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 RASL11AQ6T310 242 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 TSKUQ8WUA8 353 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 MLST8Q9BVC4 326 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 OTORQ9NRC9 128 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 ZNF586Q9NXT0 402 aa14.07□□□□□ -0.16
PTPN6-222ENST00000543744 APCSP02743 223 aa14.06□□□□□ -0.16
PTPN6-222ENST00000543744 ZFP36P26651 326 aaKnown RBP14.06□□□□□ -0.16
PTPN6-222ENST00000543744 OR10J3Q5JRS4 329 aa14.06□□□□□ -0.16
PTPN6-222ENST00000543744 KLF17Q5JT82 389 aaPredicted RBP14.06□□□□□ -0.16
PTPN6-222ENST00000543744 NUP35Q8NFH5 326 aa14.06□□□□□ -0.16
PTPN6-222ENST00000543744 WIPF2Q8TF74 440 aaPredicted RBP14.06□□□□□ -0.16
PTPN6-222ENST00000543744 C14orf144Q96I85 54 aa14.06□□□□□ -0.16
PTPN6-222ENST00000543744 NAGKQ9UJ70 344 aa14.06□□□□□ -0.16
PTPN6-222ENST00000543744 COL6A6A6NMZ7 2263 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 NCBP2LA6PVI3 153 aaKnown RBP14.05□□□□□ -0.16
PTPN6-222ENST00000543744 OOSP1A8MZH6 123 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 BMPR1BO00238 502 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 LTAP01374 205 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 SFTPCP11686 197 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 ZNF562Q6V9R5 426 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 SHANK2-AS3Q9BTD1 123 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 SAMD10Q9BYL1 202 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 ABCA1O95477 2261 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 A8MWP6 167 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 SRIP30626 198 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 BRS3P32247 399 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 MINOS1Q5TGZ0 78 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 DYNAPQ8N1N2 210 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 ARPC1AQ92747 370 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 NEU1Q99519 415 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 MINOS1-NBL1R4GNA1 71 aa14.05□□□□□ -0.16
PTPN6-222ENST00000543744 NPIPB5A8MRT5 1133 aa14.04□□□□□ -0.16
PTPN6-222ENST00000543744 NDUFS7O75251 213 aa14.04□□□□□ -0.16
PTPN6-222ENST00000543744 HOXB4P17483 251 aaPredicted RBP14.04□□□□□ -0.16
PTPN6-222ENST00000543744 UNQ6494/PRO21346Q6UXR6 183 aa14.04□□□□□ -0.16
PTPN6-222ENST00000543744 Q6ZWC4 215 aa14.04□□□□□ -0.16
PTPN6-222ENST00000543744 REC114Q7Z4M0 266 aa14.04□□□□□ -0.16
PTPN6-222ENST00000543744 BPIFA4PQ86YQ2 179 aa14.04□□□□□ -0.16
PTPN6-222ENST00000543744 HSPB9Q9BQS6 159 aa14.04□□□□□ -0.16
PTPN6-222ENST00000543744 UBTD1Q9HAC8 227 aa14.04□□□□□ -0.16
PTPN6-222ENST00000543744 HIGD1CA8MV81 97 aa14.03□□□□□ -0.16
PTPN6-222ENST00000543744 ZNF253O75346 499 aa14.03□□□□□ -0.16
PTPN6-222ENST00000543744 ZNF491Q8N8L2 437 aa14.03□□□□□ -0.16
PTPN6-222ENST00000543744 RNF125Q96EQ8 232 aa14.03□□□□□ -0.16
PTPN6-222ENST00000543744 RNF24Q9Y225 148 aa14.03□□□□□ -0.16
PTPN6-222ENST00000543744 TRAV30A0A087WSZ9 112 aa14.03□□□□□ -0.16
PTPN6-222ENST00000543744 GNG7O60262 68 aa14.03□□□□□ -0.16
PTPN6-222ENST00000543744 IL4P05112 153 aa14.03□□□□□ -0.16
PTPN6-222ENST00000543744 EXOC3-AS1Q8N2X6 119 aa14.03□□□□□ -0.16
PTPN6-222ENST00000543744 Q8N6K4 173 aa14.03□□□□□ -0.16
PTPN6-222ENST00000543744 OR4F17Q8NGA8 305 aa14.03□□□□□ -0.16
PTPN6-222ENST00000543744 RPP21Q9H633 154 aaKnown RBP14.03□□□□□ -0.16
PTPN6-222ENST00000543744 IGLV11-55A0A075B6I3 123 aa14.02□□□□□ -0.16
PTPN6-222ENST00000543744 A6NNC1 897 aa14.02□□□□□ -0.16
PTPN6-222ENST00000543744 H3BRN7 92 aa14.02□□□□□ -0.16
PTPN6-222ENST00000543744 SLAQ13239 276 aa14.02□□□□□ -0.16
PTPN6-222ENST00000543744 SIGLECL1Q8N7X8 197 aa14.02□□□□□ -0.16
PTPN6-222ENST00000543744 FANCD2OSQ96PS1 177 aa14.02□□□□□ -0.16
PTPN6-222ENST00000543744 ZNF492Q9P255 531 aa14.02□□□□□ -0.16
PTPN6-222ENST00000543744 S4R3C0 116 aa14.02□□□□□ -0.16
PTPN6-222ENST00000543744 CHD8Q9HCK8 2581 aa14.02□□□□□ -0.17
PTPN6-222ENST00000543744 ZNF705FA8MVS1 300 aaPredicted RBP14.02□□□□□ -0.17
PTPN6-222ENST00000543744 P01737 135 aa14.02□□□□□ -0.17
PTPN6-222ENST00000543744 ZNF705DP0CH99 300 aaPredicted RBP14.02□□□□□ -0.17
PTPN6-222ENST00000543744 ZNF705BP0CI00 300 aaPredicted RBP14.02□□□□□ -0.17
PTPN6-222ENST00000543744 CD33P20138 364 aa14.02□□□□□ -0.17
PTPN6-222ENST00000543744 EFNA4P52798 201 aa14.02□□□□□ -0.17
PTPN6-222ENST00000543744 MFAP4P55083 255 aa14.02□□□□□ -0.17
PTPN6-222ENST00000543744 LINC00322Q6ZN03 302 aaPredicted RBP14.02□□□□□ -0.17
PTPN6-222ENST00000543744 TTC9CQ8N5M4 171 aa14.02□□□□□ -0.17
PTPN6-222ENST00000543744 TMEM190Q8WZ59 177 aa14.02□□□□□ -0.17
PTPN6-222ENST00000543744 DAZAP1Q96EP5 407 aaKnown RBP14.02□□□□□ -0.17
PTPN6-222ENST00000543744 PRSS22Q9GZN4 317 aa14.02□□□□□ -0.17
PTPN6-222ENST00000543744 SIRPDQ9H106 197 aa14.02□□□□□ -0.17
PTPN6-222ENST00000543744 TRBV19A0A075B6N1 114 aa14.01□□□□□ -0.17
PTPN6-222ENST00000543744 WI2-2373I1.2A0A1W2PRP0 233 aa14.01□□□□□ -0.17
PTPN6-222ENST00000543744 GPX1P07203 203 aa14.01□□□□□ -0.17
PTPN6-222ENST00000543744 TMEM11P17152 192 aa14.01□□□□□ -0.17
PTPN6-222ENST00000543744 EBI3Q14213 229 aa14.01□□□□□ -0.17
PTPN6-222ENST00000543744 CT83Q5H943 113 aa14.01□□□□□ -0.17
PTPN6-222ENST00000543744 GOLT1AQ6ZVE7 132 aa14.01□□□□□ -0.17
PTPN6-222ENST00000543744 ATP5L2Q7Z4Y8 100 aa14.01□□□□□ -0.17
PTPN6-222ENST00000543744 Q86TA4 180 aa14.01□□□□□ -0.17
PTPN6-222ENST00000543744 PRORYQ9H606 182 aa14.01□□□□□ -0.17
PTPN6-222ENST00000543744 C19orf71A6NCJ1 209 aa14□□□□□ -0.17
PTPN6-222ENST00000543744 A8MWL6 223 aa14□□□□□ -0.17
PTPN6-222ENST00000543744 TOX4O94842 621 aa14□□□□□ -0.17
PTPN6-222ENST00000543744 NDPQ00604 133 aa14□□□□□ -0.17
PTPN6-222ENST00000543744 GDF5OSQ5U4N7 250 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms