RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 INPP1P49441 399 aa9.49□□□□□ -0.89
TNFRSF1A-215ENST00000543359 SNRPD3P62318 126 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-215ENST00000543359 GDF5OSQ5U4N7 250 aa9.49□□□□□ -0.89
TNFRSF1A-215ENST00000543359 COQ8AQ8NI60 647 aa9.49□□□□□ -0.89
TNFRSF1A-215ENST00000543359 C11orf45Q8TAV5 145 aa9.49□□□□□ -0.89
TNFRSF1A-215ENST00000543359 MITD1Q8WV92 249 aa9.49□□□□□ -0.89
TNFRSF1A-215ENST00000543359 SMIM8Q96KF7 97 aa9.49□□□□□ -0.89
TNFRSF1A-215ENST00000543359 CLEC5AQ9NY25 188 aa9.49□□□□□ -0.89
TNFRSF1A-215ENST00000543359 STRAPQ9Y3F4 350 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-215ENST00000543359 HLA-DRB4X5D2U9 266 aa9.49□□□□□ -0.89
TNFRSF1A-215ENST00000543359 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF1A-215ENST00000543359 IGHV4-28A0A0C4DH34 117 aa9.48□□□□□ -0.89
TNFRSF1A-215ENST00000543359 CENPXA8MT69 81 aa9.48□□□□□ -0.89
TNFRSF1A-215ENST00000543359 CFDP00746 253 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF1A-215ENST00000543359 NKX2-1P43699 371 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF1A-215ENST00000543359 TMEM14EPQ6UXP3 125 aa9.48□□□□□ -0.89
TNFRSF1A-215ENST00000543359 ACOT7LQ6ZUV0 252 aa9.48□□□□□ -0.89
TNFRSF1A-215ENST00000543359 PFDN2Q9UHV9 154 aa9.48□□□□□ -0.89
TNFRSF1A-215ENST00000543359 SLC45A2Q9UMX9 530 aa9.48□□□□□ -0.89
TNFRSF1A-215ENST00000543359 KLK5Q9Y337 293 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF1A-215ENST00000543359 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
TNFRSF1A-215ENST00000543359 CCNKO75909 580 aa9.47□□□□□ -0.89
TNFRSF1A-215ENST00000543359 MIFP14174 115 aa9.47□□□□□ -0.89
TNFRSF1A-215ENST00000543359 CNPY1Q3B7I2 92 aa9.47□□□□□ -0.89
TNFRSF1A-215ENST00000543359 C4orf46Q504U0 113 aa9.47□□□□□ -0.89
TNFRSF1A-215ENST00000543359 TMEM144Q7Z5S9 345 aa9.47□□□□□ -0.89
TNFRSF1A-215ENST00000543359 SLC25A32Q9H2D1 315 aa9.47□□□□□ -0.89
TNFRSF1A-215ENST00000543359 HRH4Q9H3N8 390 aa9.47□□□□□ -0.89
TNFRSF1A-215ENST00000543359 PSENENQ9NZ42 101 aa9.47□□□□□ -0.89
TNFRSF1A-215ENST00000543359 FBXL17Q9UF56 701 aa9.47□□□□□ -0.89
TNFRSF1A-215ENST00000543359 TBC1D24Q9ULP9 559 aa9.47□□□□□ -0.89
TNFRSF1A-215ENST00000543359 LYRM1O43325 122 aa9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SSSCA1O60232 199 aa9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 IFNA21P01568 189 aa9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 PSMB3P49720 205 aa9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 IAH1Q2TAA2 248 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 OR8I2Q8N0Y5 310 aa9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 ZBTB8BQ8NAP8 495 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 C20orf173Q96LM9 149 aa9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 CLUHP3Q96NS8 147 aa9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 MFFQ9GZY8 342 aa9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 C20orf85Q9H1P6 137 aa9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SAV1Q9H4B6 383 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 RCL1Q9Y2P8 373 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-215ENST00000543359 ISLRO14498 428 aa9.45□□□□□ -0.9
TNFRSF1A-215ENST00000543359 LY6G6CO95867 125 aa9.45□□□□□ -0.9
TNFRSF1A-215ENST00000543359 ARL16Q0P5N6 197 aa9.45□□□□□ -0.9
TNFRSF1A-215ENST00000543359 ZNF705AQ6ZN79 300 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-215ENST00000543359 FOXI2Q6ZQN5 318 aa9.45□□□□□ -0.9
TNFRSF1A-215ENST00000543359 ZNF709Q8N972 641 aa9.45□□□□□ -0.9
TNFRSF1A-215ENST00000543359 BPIFCQ8NFQ6 507 aa9.45□□□□□ -0.9
TNFRSF1A-215ENST00000543359 LINC00052Q96N35 136 aa9.45□□□□□ -0.9
TNFRSF1A-215ENST00000543359 XCL2Q9UBD3 114 aa9.45□□□□□ -0.9
TNFRSF1A-215ENST00000543359 C7orf66A4D0T2 115 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 FNDC10F2Z333 226 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 MBPP02686 304 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 TCRBP04435 133 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 METTL15P1P0C7V9 234 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 ORM2P19652 201 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 ID1P41134 155 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 TAS2R30P59541 319 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 PLP1P60201 277 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 AKR1C1Q04828 323 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 CYP2G1PQ6ZSU1 146 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 PPP1R14BQ96C90 147 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 RSG1Q9BU20 258 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 C1QTNF4Q9BXJ3 329 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 C11orf1Q9H5F2 150 aa9.44□□□□□ -0.9
TNFRSF1A-215ENST00000543359 TRAV6A0A075B6T7 132 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 TRAV8-2A0A0B4J237 113 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 A0A0J9YX75 114 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 A8MTW9 85 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 ZNF705FA8MVS1 300 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 F6UB75 175 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 K7EPK0 472 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 TSC22D2O75157 780 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 ZNF705DP0CH99 300 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 ZNF705BP0CI00 300 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 HLA-DMBP28068 263 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 GALR1P47211 349 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 NUTF2P61970 127 aaKnown RBP9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 DLK1P80370 383 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 LGALS9CQ6DKI2 356 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 PATE2Q6UY27 113 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 LINC00299Q6ZSB3 139 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 OR1B1Q8NGR6 318 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SEC22CQ9BRL7 303 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 CCDC32Q9BV29 185 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SCRT1Q9BWW7 348 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SLC25A39Q9BZJ4 359 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 SLC25A22Q9H936 323 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 GSKIPQ9P0R6 139 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 CELA1Q9UNI1 258 aa9.43□□□□□ -0.9
TNFRSF1A-215ENST00000543359 H3BRN7 92 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 CCSO14618 274 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 IGKV3-20P01619 116 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 IL5P05113 134 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 MEOX2P50222 304 aa9.42□□□□□ -0.9
TNFRSF1A-215ENST00000543359 RRAS2P62070 204 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms