RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 OR4C16Q8NGL9 310 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 OR1P1Q8NH06 330 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 FGF13Q92913 245 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 TSLPQ969D9 159 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM106AQ96A25 262 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 FXYD5Q96DB9 178 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF799Q96GE5 643 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 IP6K3Q96PC2 410 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 DERL3Q96Q80 235 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 LYSMD1Q96S90 227 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 IMMP2LQ96T52 175 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 TBX5Q99593 518 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 SIGMAR1Q99720 223 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 PRSS27Q9BQR3 290 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 ANAPC13Q9BS18 74 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF471Q9BX82 626 aaPredicted RBP2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 ATG5Q9H1Y0 275 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 OR51I1Q9H343 314 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 SPANXA1Q9NS26 97 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 FKBP11Q9NYL4 201 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 BET1LQ9NYM9 111 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 JPT1Q9UK76 154 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 C14orf166Q9Y224 244 aaKnown RBP2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 WSB1Q9Y6I7 421 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF780BQ9Y6R6 833 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 MYO16Q9Y6X6 1858 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 RAI1Q7Z5J4 1906 aaPredicted RBP2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 CENPEQ02224 2701 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 NUP210LQ5VU65 1888 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 NAV3Q8IVL0 2385 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 F5P12259 2224 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 IGLV3-10A0A075B6K4 115 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 TRBV24-1A0A075B6N3 115 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 A0A087WUU8 490 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 TRBV6-6A0A0A6YYG2 114 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 TRAV1-2A0A0B4J238 106 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 IGSF23A1L1A6 192 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM235A6NFC5 223 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 IFITM5A6NNB3 132 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 KLLNB2CW77 178 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 B4DEV8 164 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 SLC17A3O00476 420 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 COX7A2P2O60397 106 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 FOXH1O75593 365 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 TRGC2P03986 189 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 ESDP10768 282 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF19P17023 458 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 S100GP29377 79 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 RPL12P30050 165 aaKnown RBP2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 DSCR10P59022 87 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 TAS2R20P59543 309 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 RPS11P62280 158 aaKnown RBP eCLIP2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 HIST1H3AP68431 136 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 SYCNQ0VAF6 134 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 SRSF6Q13247 344 aaKnown RBP2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 ELOBQ15370 118 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 RNASE13Q5GAN3 156 aaKnown RBP2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM69Q5SWH9 247 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 TNFAIP8L2Q6P589 184 aaPredicted RBP2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 RPL22L1Q6P5R6 122 aaKnown RBP2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 Q6ZS52 159 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 NTM-AS1Q6ZSK4 140 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 HMGN2P46Q86SG4 172 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 LINC00596Q86U02 117 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 GKN2Q86XP6 184 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 PDPNQ86YL7 162 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF584Q8IVC4 421 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 SLC25A45Q8N413 288 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 LINC00612Q8N6U2 182 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 ST6GALNAC3Q8NDV1 305 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 OR4C13Q8NGP0 309 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 OR10X1Q8NGY0 326 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 OR5AK2Q8NH90 309 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 FRZBQ92765 325 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 CIB3Q96Q77 187 aaPredicted RBP2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 PSMG3Q9BT73 122 aaPredicted RBP2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 VSIRQ9H7M9 311 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM242Q9NWH2 141 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 ABRACLQ9P1F3 81 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 OR5V1Q9UGF6 321 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 SLC23A2Q9UGH3 650 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF391Q9UJN7 358 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 LAMTOR2Q9Y2Q5 125 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 MRPS16Q9Y3D3 137 aaKnown RBP2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 MYO10Q9HD67 2058 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 COL6A6A6NMZ7 2263 aa2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 SPTBN1Q01082 2364 aaKnown RBP2.63□□□□□ -1.99
SFSWAP-211ENST00000542813 LAMA1P25391 3075 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 PIKFYVEQ9Y2I7 2098 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 PLXND1Q9Y4D7 1925 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 NOTCH3Q9UM47 2321 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 LRBAP50851 2863 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 NBPF19A0A087WUL8 3843 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 TRBV6-7A0A0A0MS04 114 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 IGHV2-26A0A0B4J1V2 119 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 IGHV1-69-2A0A0G2JMI3 117 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 A0A1W2PRS3 328 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM223A0PJW6 202 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 ARL5CA6NH57 179 aa2.62□□□□□ -1.99
SFSWAP-211ENST00000542813 K7EPK0 472 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms