RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 MS4A10Q96PG2 267 aa11.39□□□□□ -0.59
DDX11-219ENST00000542242 UHRF2Q96PU4 802 aa11.39□□□□□ -0.59
DDX11-219ENST00000542242 OR4F4Q96R69 305 aa11.39□□□□□ -0.59
DDX11-219ENST00000542242 SLC25A2Q9BXI2 301 aa11.39□□□□□ -0.59
DDX11-219ENST00000542242 HIGD1AQ9Y241 93 aa11.39□□□□□ -0.59
DDX11-219ENST00000542242 C11orf94C9JXX5 98 aa11.38□□□□□ -0.59
DDX11-219ENST00000542242 TCF21O43680 179 aa11.38□□□□□ -0.59
DDX11-219ENST00000542242 Q6ZS46 218 aa11.38□□□□□ -0.59
DDX11-219ENST00000542242 LINC00305Q7Z4B0 112 aa11.38□□□□□ -0.59
DDX11-219ENST00000542242 ZNF502Q8TBZ5 544 aa11.38□□□□□ -0.59
DDX11-219ENST00000542242 EEF1AKMT3Q96AZ1 226 aa11.38□□□□□ -0.59
DDX11-219ENST00000542242 ZNF503Q96F45 646 aa11.38□□□□□ -0.59
DDX11-219ENST00000542242 TXNDC17Q9BRA2 123 aa11.38□□□□□ -0.59
DDX11-219ENST00000542242 NKX6-2Q9C056 277 aaPredicted RBP11.38□□□□□ -0.59
DDX11-219ENST00000542242 PGPEP1Q9NXJ5 209 aa11.38□□□□□ -0.59
DDX11-219ENST00000542242 OR2T8A6NH00 312 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 A6NJY4 79 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 FAM223BA6NKX1 122 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 TMEM250H0YL14 139 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 H3BUA1 57 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 HOXA3O43365 443 aaPredicted RBP11.37□□□□□ -0.59
DDX11-219ENST00000542242 TRGV3P03979 118 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 ATP5G3P48201 142 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 ATP5G2Q06055 141 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 SCGB2A2Q13296 93 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 FAM90A2PQ658T7 463 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 FAM223AQ8IWN6 122 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 SIGLECL1Q8N7X8 197 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 CLRN3Q8NCR9 226 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 Q8WTZ3 238 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 NOL4LQ96MY1 436 aaPredicted RBP11.37□□□□□ -0.59
DDX11-219ENST00000542242 PAXXQ9BUH6 204 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 GAR1Q9NY12 217 aaKnown RBP11.37□□□□□ -0.59
DDX11-219ENST00000542242 ZNF580Q9UK33 172 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 ARL2-SNX15V9GYD0 113 aa11.37□□□□□ -0.59
DDX11-219ENST00000542242 WI2-2373I1.2A0A1W2PRP0 233 aa11.36□□□□□ -0.59
DDX11-219ENST00000542242 FAM74A7A6NL05 159 aa11.36□□□□□ -0.59
DDX11-219ENST00000542242 F6UZH7 168 aa11.36□□□□□ -0.59
DDX11-219ENST00000542242 M0R036 132 aa11.36□□□□□ -0.59
DDX11-219ENST00000542242 NUPL2O15504 423 aaKnown RBP11.36□□□□□ -0.59
DDX11-219ENST00000542242 OR10J4P0C629 311 aa11.36□□□□□ -0.59
DDX11-219ENST00000542242 UBE2L3P68036 154 aaKnown RBP11.36□□□□□ -0.59
DDX11-219ENST00000542242 KIAA0141Q14154 515 aaPredicted RBP11.36□□□□□ -0.59
DDX11-219ENST00000542242 STXBP6Q8NFX7 210 aa11.36□□□□□ -0.59
DDX11-219ENST00000542242 RNF125Q96EQ8 232 aa11.36□□□□□ -0.59
DDX11-219ENST00000542242 OR51M1Q9H341 326 aa11.36□□□□□ -0.59
DDX11-219ENST00000542242 YTHDF2Q9Y5A9 579 aaKnown RBP11.36□□□□□ -0.59
DDX11-219ENST00000542242 PUS1Q9Y606 427 aaKnown RBP eCLIP11.36□□□□□ -0.59
DDX11-219ENST00000542242 TRBV7-1A0A0A6YYK4 115 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 CLDN34H7C241 214 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 PDE6DO43924 150 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 BRI3O95415 125 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 IL4P05112 153 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 CTSGP08311 255 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 PPIFP30405 207 aaKnown RBP11.35□□□□□ -0.59
DDX11-219ENST00000542242 GPR183P32249 361 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 TPPP2P59282 170 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 ZNF491Q8N8L2 437 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 SUN5Q8TC36 379 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 ZNF418Q8TF45 676 aaPredicted RBP11.35□□□□□ -0.59
DDX11-219ENST00000542242 NIPSNAP3BQ9BS92 247 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 CHRDL1Q9BU40 450 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 SLC25A39Q9BZJ4 359 aaPredicted RBP11.35□□□□□ -0.59
DDX11-219ENST00000542242 PRSS22Q9GZN4 317 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 MRPL27Q9P0M9 148 aaKnown RBP11.35□□□□□ -0.59
DDX11-219ENST00000542242 NBEAL1Q6ZS30 2694 aa11.35□□□□□ -0.59
DDX11-219ENST00000542242 ZNF727A8MUV8 499 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 H3BQ15 152 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 OR2C1O95371 312 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 PYYP10082 97 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 PF4V1P10720 104 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 BTN1A1Q13410 526 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 CLEC19AQ6UXS0 136 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 ZNF600Q6ZNG1 722 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 S100A7AQ86SG5 101 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
DDX11-219ENST00000542242 CCDC140Q96MF4 163 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 ATP6V0BQ99437 205 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 NPFFR1Q9GZQ6 430 aa11.34□□□□□ -0.59
DDX11-219ENST00000542242 DNAJC9-AS1A6NH13 148 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 H3BRN7 92 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 CLEC3BP05452 202 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 ADMP35318 185 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 ZNF674Q2M3X9 581 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 TMEM95Q3KNT9 176 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 FAM74A3Q4VXF1 159 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 AWAT1Q58HT5 328 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 TMEM86BQ8N661 226 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 FXYD5Q96DB9 178 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 TVP23CQ96ET8 276 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 USMG5Q96IX5 58 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 SMIM7Q9BQ49 75 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 SHANK2-AS3Q9BTD1 123 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 GNB4Q9HAV0 340 aa11.33□□□□□ -0.6
DDX11-219ENST00000542242 A0A1W2PRE2 83 aa11.32□□□□□ -0.6
DDX11-219ENST00000542242 TGOLN2O43493 480 aa11.32□□□□□ -0.6
DDX11-219ENST00000542242 WIPF1O43516 503 aa11.32□□□□□ -0.6
DDX11-219ENST00000542242 CFHR3Q02985 330 aa11.32□□□□□ -0.6
DDX11-219ENST00000542242 USF2Q15853 346 aaPredicted RBP11.32□□□□□ -0.6
DDX11-219ENST00000542242 LEMD1Q68G75 181 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms