RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 CT83Q5H943 113 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 C1orf122Q6ZSJ8 110 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 SPATA31B1PQ5VZV4 182 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 DMRTC2Q8IXT2 367 aaPredicted RBP8.79□□□□□ -1
GABRB3-204ENST00000541819 LYPD1Q8N2G4 141 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 Q8TAT8 98 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 MCRIP2Q9BUT9 160 aaKnown RBP8.79□□□□□ -1
GABRB3-204ENST00000541819 FBLN5Q9UBX5 448 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 KIAA0100Q14667 2235 aaKnown RBP8.79□□□□□ -1
GABRB3-204ENST00000541819 ANKRD31Q8N7Z5 1873 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 H0YJW9 148 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 ID3Q02535 119 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 GUSBP1Q15486 140 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 TMEM158Q8WZ71 300 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 RNF126Q9BV68 326 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 ZNF319Q9P2F9 582 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 C22orf46C9J442 243 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 F8VVB4 439 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 F8VWA3 439 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 SYNJ2BPP57105 145 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 DEFB131AP59861 70 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 ZFP36L1Q07352 338 aaKnown RBP8.79□□□□□ -1
GABRB3-204ENST00000541819 VSIRQ9H7M9 311 aa8.79□□□□□ -1
GABRB3-204ENST00000541819 MMP23AO75900 390 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 SPAG17Q6Q759 2223 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 GAGE12JA6NER3 117 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 RHODO00212 210 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 GAGE1Q13065 139 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 GAGE4Q13068 117 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 GAGE5Q13069 117 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 NEGR1Q7Z3B1 354 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 GATA3P23771 443 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 LIME1Q9H400 295 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 TRAV25A0A0B4J276 109 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 IGKV1-9A0A0C4DH69 117 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 WFDC1Q9HC57 220 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 COX11Q9Y6N1 276 aa8.78□□□□□ -1
GABRB3-204ENST00000541819 CD59P13987 128 aa8.77□□□□□ -1
GABRB3-204ENST00000541819 CFHR3Q02985 330 aa8.77□□□□□ -1
GABRB3-204ENST00000541819 A0A0G2JNJ9 132 aa8.77□□□□□ -1.01
GABRB3-204ENST00000541819 SHISA3A0PJX4 238 aa8.77□□□□□ -1.01
GABRB3-204ENST00000541819 GAFA1Q96PS6 74 aa8.77□□□□□ -1.01
GABRB3-204ENST00000541819 ZMAT4Q9H898 229 aa8.77□□□□□ -1.01
GABRB3-204ENST00000541819 Q9UFV3 132 aa8.77□□□□□ -1.01
GABRB3-204ENST00000541819 TDRD15B5MCY1 1934 aaKnown RBP8.77□□□□□ -1.01
GABRB3-204ENST00000541819 KLF5Q13887 457 aaPredicted RBP8.77□□□□□ -1.01
GABRB3-204ENST00000541819 SP5Q6BEB4 398 aaPredicted RBP8.77□□□□□ -1.01
GABRB3-204ENST00000541819 CD177Q8N6Q3 437 aa8.77□□□□□ -1.01
GABRB3-204ENST00000541819 RNF223E7ERA6 249 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 OVOL3O00110 214 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 IGFL4Q6B9Z1 124 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 TMEM242Q9NWH2 141 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 HIST1H2BKO60814 126 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 HIST1H2BJP06899 126 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 SELLP14151 372 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 HIST1H2BOP23527 126 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 HIST1H2BBP33778 126 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 HIST1H2BDP58876 126 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 HIST1H2BCP62807 126 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 HIST2H2BEQ16778 126 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.76□□□□□ -1.01
GABRB3-204ENST00000541819 FGFBP3Q8TAT2 258 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 HIST1H2BHQ93079 126 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 HIST1H2BNQ99877 126 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 HIST1H2BMQ99879 126 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 NDUFS5O43920 106 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 AZU1P20160 251 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 CRYGSP22914 178 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 MPZP25189 248 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 SRSF8Q9BRL6 282 aaKnown RBP8.76□□□□□ -1.01
GABRB3-204ENST00000541819 DLEC1Q9Y238 1755 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 CLPSP04118 112 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 TCTEX1D4Q5JR98 221 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 NABP1Q96AH0 204 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 NAA38Q9BRA0 125 aaKnown RBP8.76□□□□□ -1.01
GABRB3-204ENST00000541819 XCL2Q9UBD3 114 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 SIGLEC9Q9Y336 463 aa8.76□□□□□ -1.01
GABRB3-204ENST00000541819 NTN3O00634 580 aaPredicted RBP8.75□□□□□ -1.01
GABRB3-204ENST00000541819 IGHG3P01860 377 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 SAA4P35542 130 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 TAL2Q16559 108 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 NUP35Q8NFH5 326 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 BPESC1Q9GZL8 116 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 ASCC3Q8N3C0 2202 aaKnown RBP8.75□□□□□ -1.01
GABRB3-204ENST00000541819 A0A0A6YYD4 124 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 VWC2Q2TAL6 325 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 TMEM141Q96I45 108 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 SRSF3P84103 164 aaKnown RBP8.75□□□□□ -1.01
GABRB3-204ENST00000541819 FAM110DQ8TAY7 271 aaPredicted RBP8.75□□□□□ -1.01
GABRB3-204ENST00000541819 PTPRZ1P23471 2315 aaPredicted RBP8.75□□□□□ -1.01
GABRB3-204ENST00000541819 LTBP4Q8N2S1 1624 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 C9JAW5 83 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 MSMBP08118 114 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 IL17RELQ6ZVW7 336 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 AGMATQ9BSE5 352 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 UBL5Q9BZL1 73 aa8.75□□□□□ -1.01
GABRB3-204ENST00000541819 hDV102S1A0JD36 115 aa8.74□□□□□ -1.01
GABRB3-204ENST00000541819 PFN2P35080 140 aa8.74□□□□□ -1.01
GABRB3-204ENST00000541819 LY96Q9Y6Y9 160 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms