RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 AREGP15514 252 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 MEF2BQ02080 365 aaPredicted RBP6.89□□□□□ -1.31
THBS3-210ENST00000541576 PNRC1Q12796 327 aaPredicted RBP6.89□□□□□ -1.31
THBS3-210ENST00000541576 FXYD3Q14802 87 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 MLANAQ16655 118 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 DNLZQ5SXM8 178 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 UNQ5815/PRO19632Q6UWF5 114 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 SGMS2Q8NHU3 365 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 SSMEM1Q8WWF3 244 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 P2RX4Q99571 388 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 VPS25Q9BRG1 176 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 IFNA1P01562 189 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 PSMB3P49720 205 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 C1orf194Q5T5A4 169 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 ZNF562Q6V9R5 426 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 Q6ZN92 141 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 CIARTQ8N365 385 aaPredicted RBP6.88□□□□□ -1.31
THBS3-210ENST00000541576 Q8N9W7 124 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 SRSF8Q9BRL6 282 aaKnown RBP6.88□□□□□ -1.31
THBS3-210ENST00000541576 SONP18583 2426 aaKnown RBP6.88□□□□□ -1.31
THBS3-210ENST00000541576 ZFHX3Q15911 3703 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 SMAD7O15105 426 aaKnown RBP6.88□□□□□ -1.31
THBS3-210ENST00000541576 FRMD6-AS1P0C7T7 363 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 RND2P52198 227 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 CX3CL1P78423 397 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 GBGT1Q8N5D6 347 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 PIFOQ8TCI5 191 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 RASL11BQ9BPW5 248 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 PSMG3Q9BT73 122 aaPredicted RBP6.88□□□□□ -1.31
THBS3-210ENST00000541576 TP73-AS1Q9UF72 201 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 M0QZ24 198 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 ADMP35318 185 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 MAJINQ3KP22 176 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 C19orf35Q6ZS72 473 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 ZNF114Q8NC26 417 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 ARPC1AQ92747 370 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 SMDT1Q9H4I9 107 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 WDR83OSQ9Y284 106 aa6.88□□□□□ -1.31
THBS3-210ENST00000541576 AKAP9Q99996 3911 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 SLC17A3O00476 420 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 SERF1AO75920 110 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 HLA-DRB1P01911 266 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 TCL1AP56279 114 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 FFAR4Q5NUL3 377 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 TREML4Q6UXN2 200 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 CENPVQ7Z7K6 275 aaPredicted RBP6.87□□□□□ -1.31
THBS3-210ENST00000541576 TMEM219Q86XT9 240 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 RNASEH2CQ8TDP1 164 aaKnown RBP6.87□□□□□ -1.31
THBS3-210ENST00000541576 SLC25A33Q9BSK2 321 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 NPCDR1Q9BY65 106 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 NPVFQ9HCQ7 196 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 TIMM9Q9Y5J7 89 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 H3BUX3 64 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 MPDU1O75352 247 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 NDUFB4O95168 129 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 OR5G3P0C626 314 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 NDPQ00604 133 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 CD69Q07108 199 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 GCSAMLQ5JQS6 135 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 KCNIP4Q6PIL6 250 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 Q6ZWC4 215 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 RPP25LQ8N5L8 163 aaKnown RBP6.87□□□□□ -1.31
THBS3-210ENST00000541576 STPG4Q8N801 248 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 MOB4Q9Y3A3 225 aa6.87□□□□□ -1.31
THBS3-210ENST00000541576 MXRA5Q9NR99 2828 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 IGHV7-81A0A0B4J1V7 117 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 FNDC10F2Z333 226 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 FSHBP01225 129 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 OPRK1P41145 380 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 IER3P46695 156 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 MFAP2P55001 183 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 SERF2P84101 59 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 FAM19A2Q8N3H0 131 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 CACNG8Q8WXS5 425 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 C22orf15Q8WYQ4 148 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 ZC2HC1AQ96GY0 325 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 F11RQ9Y624 299 aaKnown RBP6.86□□□□□ -1.31
THBS3-210ENST00000541576 FLNBO75369 2602 aaKnown RBP6.86□□□□□ -1.31
THBS3-210ENST00000541576 C17orf112F2Z3M2 114 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 ATP5G3P48201 142 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 HNRNPA3P51991 378 aaKnown RBP6.86□□□□□ -1.31
THBS3-210ENST00000541576 ZNF90Q03938 601 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 LY6EQ16553 131 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 TMEM183BQ1AE95 376 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 ACOT6Q3I5F7 207 aaPredicted RBP6.86□□□□□ -1.31
THBS3-210ENST00000541576 ACSM6Q6P461 480 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 TEPPQ6URK8 271 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 BCL6BQ8N143 479 aaPredicted RBP6.86□□□□□ -1.31
THBS3-210ENST00000541576 C5orf56Q8N8D9 126 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 MDFIC2A0A1B0GVS7 189 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 C11orf94C9JXX5 98 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 VAMP3Q15836 100 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 DEFB112Q30KQ8 113 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 COL5A1-AS1Q5SY13 56 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 PVRIGQ6DKI7 326 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 OR10G4Q8NGN3 311 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 OR10G9Q8NGN4 311 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 OR10G7Q8NGN6 311 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 ACY3Q96HD9 319 aa6.86□□□□□ -1.31
THBS3-210ENST00000541576 SLC35E1Q96K37 410 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms