RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 KAAG1Q9UBP8 84 aa10.02□□□□□ -0.81
RNF4-222ENST00000541204 AKAP6Q13023 2319 aa10.02□□□□□ -0.81
RNF4-222ENST00000541204 SLC25A5P05141 298 aaKnown RBP10.01□□□□□ -0.81
RNF4-222ENST00000541204 SUB1P53999 127 aaKnown RBP eCLIP10.01□□□□□ -0.81
RNF4-222ENST00000541204 ZNF672Q499Z4 452 aaPredicted RBP10.01□□□□□ -0.81
RNF4-222ENST00000541204 RNASEKQ6P5S7 137 aaKnown RBP10.01□□□□□ -0.81
RNF4-222ENST00000541204 PDPNQ86YL7 162 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 STPG4Q8N801 248 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 OR1B1Q8NGR6 318 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 VSTM2AQ8TAG5 236 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 ST6GALNAC6Q969X2 333 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 C7orf69Q9H7B7 122 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 WASHC3Q9Y3C0 194 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 SPTAN1Q13813 2472 aaKnown RBP10.01□□□□□ -0.81
RNF4-222ENST00000541204 A0A1W2PPI3 338 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 M0R2Z0 102 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 HIST1H1EP10412 219 aaKnown RBP10.01□□□□□ -0.81
RNF4-222ENST00000541204 HCP5Q6MZN7 132 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 EBLN2Q6P2I7 272 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 THAP8Q8NA92 274 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 ALKBH7Q9BT30 221 aaPredicted RBP10.01□□□□□ -0.81
RNF4-222ENST00000541204 TNFRSF19Q9NS68 423 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 EPDR1Q9UM22 224 aa10.01□□□□□ -0.81
RNF4-222ENST00000541204 MED13LQ71F56 2210 aa10□□□□□ -0.81
RNF4-222ENST00000541204 ARHGAP32A7KAX9 2087 aa10□□□□□ -0.81
RNF4-222ENST00000541204 IGHV2-26A0A0B4J1V2 119 aa10□□□□□ -0.81
RNF4-222ENST00000541204 PGPA6NDG6 321 aa10□□□□□ -0.81
RNF4-222ENST00000541204 FAM181BA6NEQ2 426 aa10□□□□□ -0.81
RNF4-222ENST00000541204 C22orf46C9J442 243 aa10□□□□□ -0.81
RNF4-222ENST00000541204 MYCNOSP40205 109 aa10□□□□□ -0.81
RNF4-222ENST00000541204 TCF24Q7RTU0 167 aa10□□□□□ -0.81
RNF4-222ENST00000541204 OR2D3Q8NGH3 330 aa10□□□□□ -0.81
RNF4-222ENST00000541204 ONECUT1Q9UBC0 465 aa10□□□□□ -0.81
RNF4-222ENST00000541204 LAMTOR2Q9Y2Q5 125 aa10□□□□□ -0.81
RNF4-222ENST00000541204 IGHV3-21A0A0B4J1V1 117 aa10□□□□□ -0.81
RNF4-222ENST00000541204 Q56UQ5 140 aa10□□□□□ -0.81
RNF4-222ENST00000541204 OR4A5Q8NH83 315 aa10□□□□□ -0.81
RNF4-222ENST00000541204 ZFP30Q9Y2G7 519 aa10□□□□□ -0.81
RNF4-222ENST00000541204 PPIAL4CA0A0B4J2A2 164 aa9.99□□□□□ -0.81
RNF4-222ENST00000541204 H3BTX0 84 aa9.99□□□□□ -0.81
RNF4-222ENST00000541204 PPIAL4GP0DN37 164 aa9.99□□□□□ -0.81
RNF4-222ENST00000541204 CD24P25063 80 aa9.99□□□□□ -0.81
RNF4-222ENST00000541204 KLF5Q13887 457 aaPredicted RBP9.99□□□□□ -0.81
RNF4-222ENST00000541204 DMRTA1Q5VZB9 504 aa9.99□□□□□ -0.81
RNF4-222ENST00000541204 LINC00322Q6ZN03 302 aaPredicted RBP9.99□□□□□ -0.81
RNF4-222ENST00000541204 KLHDC1Q8N7A1 406 aa9.99□□□□□ -0.81
RNF4-222ENST00000541204 A0A1W2PRD5 423 aa9.99□□□□□ -0.81
RNF4-222ENST00000541204 A0A1W2PRF3 423 aa9.99□□□□□ -0.81
RNF4-222ENST00000541204 A0A1W2PRM7 423 aa9.99□□□□□ -0.81
RNF4-222ENST00000541204 KIR3DL3Q8N743 410 aa9.99□□□□□ -0.81
RNF4-222ENST00000541204 ABCA1O95477 2261 aa9.99□□□□□ -0.81
RNF4-222ENST00000541204 NDUFB8O95169 186 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 LINC00614P0C842 121 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 BTF3P20290 206 aaKnown RBP9.98□□□□□ -0.81
RNF4-222ENST00000541204 MRGPRG-AS1Q2M3A8 158 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 LEMD1Q68G75 181 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 PERPQ96FX8 193 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 CHRDL1Q9BU40 450 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 OR2J3O76001 311 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 PMCHL1Q16048 86 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 VMA21Q3ZAQ7 101 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 LINC00311Q8N616 119 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 OR8B3Q8NGG8 313 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 OR8B2Q96RD0 313 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 INSIG2Q9Y5U4 225 aa9.98□□□□□ -0.81
RNF4-222ENST00000541204 A0A1B0GXF2 115 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 M0QZ24 198 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 NBEAP1P0C6P0 100 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 TSPOP30536 169 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 HINT1P49773 126 aaPredicted RBP9.97□□□□□ -0.81
RNF4-222ENST00000541204 FOXA3P55318 350 aaPredicted RBP9.97□□□□□ -0.81
RNF4-222ENST00000541204 SPATA12Q7Z6I5 190 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 URB1-AS1Q96HZ7 61 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 GPR82Q96P67 336 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 CLEC5AQ9NY25 188 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 HIVEP3Q5T1R4 2406 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 C2orf70A6NJV1 201 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 SH2D7A6NKC9 451 aaPredicted RBP9.97□□□□□ -0.81
RNF4-222ENST00000541204 ARF6P62330 175 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 FBXL19-AS1Q494R0 122 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 KLF12Q9Y4X4 402 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 IGLC7A0M8Q6 106 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 ATP5L2Q7Z4Y8 100 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 STXBP6Q8NFX7 210 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 GTSF1Q8WW33 167 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 MLST8Q9BVC4 326 aa9.97□□□□□ -0.81
RNF4-222ENST00000541204 GSX1Q9H4S2 264 aaPredicted RBP9.97□□□□□ -0.81
RNF4-222ENST00000541204 RPP21Q9H633 154 aaKnown RBP9.97□□□□□ -0.81
RNF4-222ENST00000541204 TRAV9-2A0A087WT02 112 aa9.96□□□□□ -0.81
RNF4-222ENST00000541204 IGLL1P15814 213 aa9.96□□□□□ -0.81
RNF4-222ENST00000541204 MC5RP33032 325 aa9.96□□□□□ -0.81
RNF4-222ENST00000541204 HBBP68871 147 aa9.96□□□□□ -0.81
RNF4-222ENST00000541204 Q6ZVH6 145 aa9.96□□□□□ -0.81
RNF4-222ENST00000541204 ZNF596Q8TC21 504 aa9.96□□□□□ -0.81
RNF4-222ENST00000541204 PGLYRP4Q96LB8 373 aa9.96□□□□□ -0.81
RNF4-222ENST00000541204 IGHV1-3A0A0C4DH29 117 aa9.96□□□□□ -0.82
RNF4-222ENST00000541204 BUB1B-PAK6H3BSN5 160 aa9.96□□□□□ -0.82
RNF4-222ENST00000541204 TCF21O43680 179 aa9.96□□□□□ -0.82
RNF4-222ENST00000541204 FAM71F2Q6NXP2 309 aa9.96□□□□□ -0.82
RNF4-222ENST00000541204 RPEQ96AT9 228 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms