RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 WISP2O76076 250 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 NHLRC4P0CG21 123 aaPredicted RBP7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 FOXI1Q12951 378 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 C10orf128Q5T292 105 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 AMTNQ6UX39 209 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 LINC00479Q96M42 142 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 A0A0J9YW62 118 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 A0A1B0GWB2 263 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 FAM90A27PA6NNH2 459 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 CSN3P07498 182 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 UCNP55089 124 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 RPL30P62888 115 aaKnown RBP7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 H2BFWTQ7Z2G1 175 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 RBMXL3Q8N7X1 1067 aaKnown RBP7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 CITED1Q99966 193 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 ZNF71Q9NQZ8 489 aaPredicted RBP7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 ACACBO00763 2458 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 IGLL5B9A064 214 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 SYNGR3O43761 229 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 CA6P23280 308 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 PPIFP30405 207 aaKnown RBP7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 NMUP48645 174 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 C3AR1Q16581 482 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 Q6ZS92 163 aa7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 LSM4Q9Y4Z0 139 aaKnown RBP7.68□□□□□ -1.18
CTNNA1-243ENST00000540387 PRSS29PA6NIE9 313 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 FNDC10F2Z333 226 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 FKBP2P26885 142 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 Q6AWC8 147 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 ZNF837Q96EG3 531 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 ZNF503Q96F45 646 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 PLEKHA3Q9HB20 300 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 HEYLQ9NQ87 328 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 NHP2Q9NX24 153 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 SLC25A10Q9UBX3 287 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 BSNQ9UPA5 3926 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 TLN1Q9Y490 2541 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 TRAV24A0A0B4J272 114 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 C17orf98A8MV24 154 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 PRSS46E5RG02 174 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 ZNF137PP52743 207 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 BRWD1-AS2P59051 145 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 SRYQ05066 204 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 ZNF562Q6V9R5 426 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 GGNQ86UU5 652 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 FGF23Q9GZV9 251 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 SPTA1P02549 2419 aa7.67□□□□□ -1.18
CTNNA1-243ENST00000540387 IGHV3-15A0A0B4J1V0 119 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 C3orf80F5H4A9 247 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 ZNHIT1O43257 154 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 ATP5J2P56134 94 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 ANXA2RQ3ZCQ2 193 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 LCNL1Q6ZST4 164 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 OR8A1Q8NGG7 326 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 GLMPQ8WWB7 406 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 PRELID3AQ96N28 172 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 SVILO95425 2214 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 TANC2Q9HCD6 1990 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 ZFAND6Q6FIF0 208 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 ZNF808Q8N4W9 903 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 SRXN1Q9BYN0 137 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 AP5S1Q9NUS5 200 aa7.66□□□□□ -1.18
CTNNA1-243ENST00000540387 TRGV5A0A0B4J1U4 118 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 TCRBV4S1A1TA0A5B7 111 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 C16orf97H3BN30 126 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 K7EMI3 77 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 CHEK1O14757 476 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 CXCL13O43927 109 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 PATE4P0C8F1 98 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 CSN1S1P47710 185 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 FAM27BQ5VT28 67 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 MKXQ8IYA7 352 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 FGFBP3Q8TAT2 258 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 ATRXP46100 2492 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 A0A087WX48 190 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 CCDC179H3BU77 68 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 APOHP02749 345 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 LGALS9BQ3B8N2 356 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 LGALS9CQ6DKI2 356 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 NFE4Q86UQ8 179 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 ZNF488Q96MN9 340 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 SPRR3Q9UBC9 169 aa7.65□□□□□ -1.18
CTNNA1-243ENST00000540387 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 GAGE12JA6NER3 117 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 NPIPB5A8MRT5 1133 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 GAGE7O76087 117 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 GAGE12FP0CL80 117 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 GAGE12GP0CL81 117 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 GAGE12IP0CL82 117 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 ERVK11-1P61568 191 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 CACNG7P62955 275 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 GAGE4Q13068 117 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 ABHD12Q8N2K0 398 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 TEX29Q8N6K0 151 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 ATP6V0E2Q8NHE4 81 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 PGLYRP4Q96LB8 373 aa7.65□□□□□ -1.19
CTNNA1-243ENST00000540387 HEATR1Q9H583 2144 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 FAM90A9PA6NNJ1 464 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 FABP5P3A8MUU1 101 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 NPIPB6E9PJ23 425 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms