RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 NABP2Q9BQ15 211 aa6.19□□□□□ -1.42
CCDC60-204ENST00000539847 SLC25A33Q9BSK2 321 aa6.19□□□□□ -1.42
CCDC60-204ENST00000539847 TNFRSF19Q9NS68 423 aa6.19□□□□□ -1.42
CCDC60-204ENST00000539847 A0A1B0GXF2 115 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 C16orf97H3BN30 126 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 K7ERU9 68 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 M0R2Z0 102 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 MGST3O14880 152 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 FCGR3BO75015 233 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 FOXH1O75593 365 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 CGB3P0DN86 165 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 CGB7P0DN87 165 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 HIST1H1EP10412 219 aaKnown RBP6.18□□□□□ -1.42
CCDC60-204ENST00000539847 IGLL1P15814 213 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 HINT1P49773 126 aaPredicted RBP6.18□□□□□ -1.42
CCDC60-204ENST00000539847 AESQ08117 197 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 PSG5Q15238 335 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 TNXAQ16473 311 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 EBLN2Q6P2I7 272 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 SPATA12Q7Z6I5 190 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 MDP1Q86V88 176 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 ABHD12Q8N2K0 398 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 STXBP6Q8NFX7 210 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 OR1L8Q8NGR8 309 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 TMEM158Q8WZ71 300 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 RCHY1Q96PM5 261 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 NDFIP1Q9BT67 221 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 GFRA4Q9GZZ7 299 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 TMEM191AQ9H0A3 160 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 PSG11Q9UQ72 335 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 KLF12Q9Y4X4 402 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 MED12Q93074 2177 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 DSCAMO60469 2012 aa6.18□□□□□ -1.42
CCDC60-204ENST00000539847 YLPM1P49750 1951 aaKnown RBP6.17□□□□□ -1.42
CCDC60-204ENST00000539847 TAX1BP3O14907 124 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 IGHV3-9P01782 118 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 FRMD6-AS1P0C7T7 363 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 HNF1AP20823 631 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 LOXP28300 417 aaPredicted RBP6.17□□□□□ -1.42
CCDC60-204ENST00000539847 FOXG1P55316 489 aaPredicted RBP6.17□□□□□ -1.42
CCDC60-204ENST00000539847 SEC11AP67812 179 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 VAMP3Q15836 100 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 OCIAD2Q56VL3 154 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 SPATA31B1PQ5VZV4 182 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 SLC25A34Q6PIV7 304 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 UNQ5815/PRO19632Q6UWF5 114 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 MIR17HGQ75NE6 70 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 GCSAMQ8N6F7 178 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 OR13A1Q8NGR1 328 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 OR1L4Q8NGR5 311 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 SSMEM1Q8WWF3 244 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 ZNF503Q96F45 646 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 PERPQ96FX8 193 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 ZNF714Q96N38 554 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 LINC00574Q9H8X3 128 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 PLEKHA3Q9HB20 300 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 ZNF492Q9P255 531 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 CHTOPQ9Y3Y2 248 aaKnown RBP6.17□□□□□ -1.42
CCDC60-204ENST00000539847 MED12LQ86YW9 2145 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 NCKAP5O14513 1909 aa6.17□□□□□ -1.42
CCDC60-204ENST00000539847 CHD3Q12873 2000 aaKnown RBP6.16□□□□□ -1.42
CCDC60-204ENST00000539847 TRBV6-1A0A0K0K1D8 114 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 A8MWL6 223 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 HSBP1L1C9JCN9 74 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 M0R1X1 148 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 UPK2O00526 184 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 OR7C2O60412 319 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 LIPFP07098 398 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 DEFA4P12838 97 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 APOBEC3AP31941 199 aaPredicted RBP6.16□□□□□ -1.42
CCDC60-204ENST00000539847 PRDX2P32119 198 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 MFAP2P55001 183 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 LOXL3P58215 753 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 PRCDQ00LT1 54 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 HIST1H1AQ02539 215 aaPredicted RBP6.16□□□□□ -1.42
CCDC60-204ENST00000539847 KRTAP1-1Q07627 177 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 FAM27E3Q08E93 113 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 SLAQ13239 276 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 GUSBP1Q15486 140 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 KIAA1644Q3SXP7 199 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 BVES-AS1Q5T3Y7 98 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 ZNF474Q6S9Z5 364 aaPredicted RBP6.16□□□□□ -1.42
CCDC60-204ENST00000539847 WDR82Q6UXN9 313 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 NUP35Q8NFH5 326 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 SLC25A40Q8TBP6 338 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 NUDT11Q96G61 164 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 FAM167A-AS1Q96KT0 104 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 PRSS22Q9GZN4 317 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 RNASE7Q9H1E1 156 aaKnown RBP6.16□□□□□ -1.42
CCDC60-204ENST00000539847 CST9LQ9H4G1 147 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 UBTD1Q9HAC8 227 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 IDI2-AS1Q9NZ38 188 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 PEF1Q9UBV8 284 aaKnown RBP6.16□□□□□ -1.42
CCDC60-204ENST00000539847 HSPB8Q9UJY1 196 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 AMMECR1Q9Y4X0 333 aaPredicted RBP6.16□□□□□ -1.42
CCDC60-204ENST00000539847 KIAA1549Q9HCM3 1950 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 KIAA2026Q5HYC2 2103 aa6.16□□□□□ -1.42
CCDC60-204ENST00000539847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.15□□□□□ -1.42
CCDC60-204ENST00000539847 A0A1B0GW15 77 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms