RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 MYCNOSP40205 109 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 MOB3BQ86TA1 216 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 GCSAMQ8N6F7 178 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 FXYD5Q96DB9 178 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 SPAG8Q99932 426 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-209ENST00000538654 MLST8Q9BVC4 326 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 H3BUT2 72 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 SAA2P0DJI9 122 aaPredicted RBP7.28□□□□□ -1.24
SNHG1-209ENST00000538654 PYYP10082 97 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 MAGEA5P43359 124 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 PLP1P60201 277 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 ZNF747Q9BV97 191 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 TTTY12Q9BZ98 90 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 CALYQ9NYX4 217 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 TEX50A0A1B0GTY4 177 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 C19orf71A6NCJ1 209 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 SRRM4A7MD48 611 aaKnown RBP7.28□□□□□ -1.24
SNHG1-209ENST00000538654 ERHP84090 104 aaKnown RBP7.28□□□□□ -1.24
SNHG1-209ENST00000538654 PSG3Q16557 428 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 ASPHD1Q5U4P2 390 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 MORN5Q5VZ52 161 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 TDHQ8IZJ6 230 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 TEX45Q8NA69 505 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 GTSF1Q8WW33 167 aa7.28□□□□□ -1.24
SNHG1-209ENST00000538654 A1L4Q6 167 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 LGALS7P47929 136 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 KIR3DS1Q14943 382 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 NEU4Q8WWR8 484 aaPredicted RBP7.27□□□□□ -1.25
SNHG1-209ENST00000538654 GUCD1Q96NT3 240 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 NPFFR1Q9GZQ6 430 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 RABAC1Q9UI14 185 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 A0A1W2PPM0 123 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 TCRBV4S1A1TA0A5B7 111 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 CEACAM4O75871 244 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 LTAP01374 205 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 CRYGBP07316 175 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 FGF6P10767 208 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 FABP2P12104 132 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 CT45A1Q5HYN5 189 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 FA2HQ7L5A8 372 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 OR2Z1Q8NG97 314 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 CT45A3Q8NHU0 189 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 SPCS1Q9Y6A9 102 aa7.27□□□□□ -1.25
SNHG1-209ENST00000538654 INS-IGF2F8WCM5 200 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 MOSP00540 346 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 MYOD1P15172 320 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 ZNF137PP52743 207 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 GNG5P63218 68 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 GUSBP1Q15486 140 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 TMEM30BQ3MIR4 351 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 PSMG4Q5JS54 123 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 RBMXL3Q8N7X1 1067 aaKnown RBP7.26□□□□□ -1.25
SNHG1-209ENST00000538654 CT55Q8WUE5 264 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 TMEM190Q8WZ59 177 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 CACNA1EQ15878 2313 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 A0A1B0GV72 72 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 PGPA6NDG6 321 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 NPIPB6E9PJ23 425 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 IGHV3-13P01766 116 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 IGHV3-7P01780 117 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 APOHP02749 345 aaPredicted RBP7.26□□□□□ -1.25
SNHG1-209ENST00000538654 SUB1P53999 127 aaKnown RBP eCLIP7.26□□□□□ -1.25
SNHG1-209ENST00000538654 RIGQ13278 110 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 SERTAD4-AS1Q5TG53 156 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 SEM1Q6ZVN7 128 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 WFDC8Q8IUA0 241 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 RPRMLQ8N4K4 120 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 OR5AN1Q8NGI8 311 aa7.26□□□□□ -1.25
SNHG1-209ENST00000538654 RANBP2P49792 3224 aaKnown RBP7.26□□□□□ -1.25
SNHG1-209ENST00000538654 IGKV1D-17A0A075B6S4 117 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 SRRM5B3KS81 715 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 NTN3O00634 580 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-209ENST00000538654 SPRY2O43597 315 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 FABP6P51161 128 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 MLANAQ16655 118 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 LGALS9BQ3B8N2 356 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 LGALS9CQ6DKI2 356 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 C1orf229Q6ZS94 237 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-209ENST00000538654 SLC25A48Q6ZT89 311 aaKnown RBP7.25□□□□□ -1.25
SNHG1-209ENST00000538654 PRSS3P2Q8NHM4 247 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 BRWD1Q9NSI6 2320 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 KBTBD11-OT1A0A1B0GTJ5 212 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 J3QR89 54 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 FTH1P19P0C7X4 201 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 CGB3P0DN86 165 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 CGB7P0DN87 165 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 CD24P25063 80 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 COL8A1P27658 744 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 ZNF138P52744 262 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 HOXA4Q00056 320 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-209ENST00000538654 TIMM23BQ5SRD1 257 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 PATE2Q6UY27 113 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 LINC00305Q7Z4B0 112 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 THAP8Q8NA92 274 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 GATD1Q8NB37 220 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 SIGMAR1Q99720 223 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 KLF13Q9Y2Y9 288 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-209ENST00000538654 DOCK7Q96N67 2140 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 A0A1B0GUT8 65 aa7.25□□□□□ -1.25
SNHG1-209ENST00000538654 TMEM189A5PLL7 270 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms