RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 LYRM2Q9NU23 88 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 BET1LQ9NYM9 111 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 FOXA2Q9Y261 457 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 MMP24Q9Y5R2 645 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 WSB1Q9Y6I7 421 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM56-RWDD3S4R434 201 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 C2CD3Q4AC94 2353 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 TRAV1-1A0A0B4J248 108 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 A0A1W2PN81 502 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 C15orf61A6NNL5 157 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 FCN1O00602 326 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 CYB5BO43169 146 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 SSSCA1O60232 199 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 YIF1AO95070 293 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 IFNA5P01569 189 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 IGKV1-39P01597 117 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 IGKV1-5P01602 117 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 OPN1MWP04001 364 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 IGKV1D-39P04432 117 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 IGF1P05019 195 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 APELAP0DMC3 54 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 OPN1MW2P0DN77 364 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 OPN1MW3P0DN78 364 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 DEFA4P12838 97 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 CHRNA7P36544 502 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 RPL27AP46776 148 aaKnown RBP3.36□□□□□ -1.87
SNHG1-208ENST00000538266 CEBPGP53567 150 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 PKIAP61925 76 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 RPL23AP62750 156 aaKnown RBP3.36□□□□□ -1.87
SNHG1-208ENST00000538266 DLK1P80370 383 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 NDPQ00604 133 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 ELOBQ15370 118 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 HAGHQ16775 308 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 KRTAP21-3Q3LHN1 58 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 KHDC3LQ587J8 217 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 CXorf66Q5JRM2 361 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-208ENST00000538266 C10orf55Q5SWW7 151 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 SLC25A24Q6NUK1 477 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 TEX38Q6PEX7 206 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 SPSB3Q6PJ21 355 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF329Q86UD4 541 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 SELENOHQ8IZQ5 122 aaKnown RBP3.36□□□□□ -1.87
SNHG1-208ENST00000538266 HIST3H2BBQ8N257 126 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 CYB561D1Q8N8Q1 229 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 OR5AU1Q8NGC0 362 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 OR1L8Q8NGR8 309 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 Q8WTZ3 238 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 LSM10Q969L4 123 aaKnown RBP3.36□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM68Q96MH6 324 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 RARRES2Q99969 163 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 SRSF8Q9BRL6 282 aaKnown RBP3.36□□□□□ -1.87
SNHG1-208ENST00000538266 FAM103A1Q9BTL3 118 aaKnown RBP3.36□□□□□ -1.87
SNHG1-208ENST00000538266 HIPK2Q9H2X6 1198 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 C11orf1Q9H5F2 150 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 PLEKHA3Q9HB20 300 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 ENY2Q9NPA8 101 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF355PQ9NSJ1 428 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM14BQ9NUH8 114 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 DOK5Q9P104 306 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 CACNG5Q9UF02 275 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 LINC00527Q9UJ94 153 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF580Q9UK33 172 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF257Q9Y2Q1 563 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 OR51B2Q9Y5P1 312 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 JMJD1CQ15652 2540 aa3.36□□□□□ -1.87
SNHG1-208ENST00000538266 TGIF2-C20orf24A0A0A6YYL0 155 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 TRAV3A0A0B4J244 114 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 TEX50A0A1B0GTY4 177 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 A0A1B0GU03 582 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 TCRBV4S1A1TA0A5B7 111 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 SMCO3A2RU48 225 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 FAM24AA6NFZ4 105 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 IFITM10A6NMD0 228 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 CEBPZOSA8MTT3 80 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF727A8MUV8 499 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 G3V318 75 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 HIST1H2BKO60814 126 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 IGHG4P01861 327 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 TRGV3P03979 118 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 HIST1H2BJP06899 126 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 OR9G9P0C7N8 305 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 BCL2P10415 239 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 SLC25A6P12236 298 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 HIST1H1BP16401 226 aaKnown RBP3.35□□□□□ -1.87
SNHG1-208ENST00000538266 FGF7P21781 194 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 HIST1H2BOP23527 126 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 DDTP30046 118 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 HIST1H2BBP33778 126 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 RND2P52198 227 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 CRIP2P52943 208 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-208ENST00000538266 HIST1H2BDP58876 126 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 TPPP2P59282 170 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 TAS2R30P59541 319 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 SPCS3P61009 180 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 RAB4BP61018 213 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 HIST1H2BCP62807 126 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 CCL20P78556 96 aa3.35□□□□□ -1.87
SNHG1-208ENST00000538266 ERHP84090 104 aaKnown RBP3.35□□□□□ -1.87
SNHG1-208ENST00000538266 PRCDQ00LT1 54 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms