RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CXCL12P48061 93 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 PLGLB1Q02325 96 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 TBC1D28Q2M2D7 210 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 C16orf47Q6ZP98 133 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 RASL10AQ92737 203 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 FMC1Q96HJ9 113 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 TTTY13Q9BZ97 58 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 FGF23Q9GZV9 251 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 USF3Q68DE3 2245 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 LOC107984156A0A0G2JMH3 177 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 LINC01619G3V211 115 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 CELA2AP08217 269 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 LOXL1Q08397 574 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 ARL17AQ8IVW1 177 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 FAM167A-AS1Q96KT0 104 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 HTTP42858 3142 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 COL5A1P20908 1838 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 UNC13CQ8NB66 2214 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 RP1P56715 2156 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 TRAV8-2A0A0B4J237 113 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 H0Y8X5 98 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 TWIST1Q15672 202 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 MORN3Q6PF18 240 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 SBSPONQ8IVN8 264 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 C1orf210Q8IVY1 113 aa6.86□□□□□ -1.31
SRGAP1-202ENST00000537556 XIRP2A4UGR9 3374 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 FCGR3BO75015 233 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 TGFAP01135 160 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 GLRXP35754 106 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 C2orf27AQ580R0 203 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 LINC00322Q6ZN03 302 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 LRRC75A-AS1Q8N1F1 130 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 FADS6Q8N9I5 356 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 FAM173AQ9BQD7 235 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 SPANXCQ9NY87 97 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 KLF13Q9Y2Y9 288 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 MYMXA0A1B0GTQ4 84 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 OOEPA6NGQ2 149 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 OTOL1A6NHN0 477 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 DPM2O94777 84 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 OR2H2O95918 312 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 NGFP01138 241 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 SP1P08047 785 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 FOXG1P55316 489 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 ZC2HC1BQ5TFG8 222 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 PDPNQ86YL7 162 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 Q8IYB0 196 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 ORMDL3Q8N138 153 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 OR13C6PQ8NH95 151 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 RNF138Q8WVD3 245 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 SPRY4Q9C004 299 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 CRISPLD2Q9H0B8 497 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 TET1Q8NFU7 2136 aa6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 HEATR1Q9H583 2144 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-202ENST00000537556 TMEM30CPA0ZSE6 113 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 PRSS1P07477 247 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 GTSCR1Q86UQ5 136 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 OR1L4Q8NGR5 311 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 FOXB1Q99853 325 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 EXPH5Q8NEV8 1989 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 IGHV3-15A0A0B4J1V0 119 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 WI2-2373I1.2A0A1W2PRP0 233 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 J3KT08 172 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 DLL1O00548 723 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 HSPE1P61604 102 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 GNG5P63218 68 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 MBNL2Q5VZF2 373 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 ANKRD29Q8N6D5 301 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 OCIAD1Q9NX40 245 aa6.84□□□□□ -1.31
SRGAP1-202ENST00000537556 TRBV7-3A0A075B6L6 115 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 NCBP2LA6PVI3 153 aaKnown RBP6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 C12orf77C9JDV5 145 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 H3BVH4 76 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 COX7A2P2O60397 106 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 ATP5LO75964 103 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 LINC00694P0DN24 101 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 PYYP10082 97 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 C1orf61Q13536 156 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 TMEM196Q5HYL7 178 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 OR1L8Q8NGR8 309 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 ITLN1Q8WWA0 313 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 PRNDQ9UKY0 176 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 HCFC1P51610 2035 aa6.84□□□□□ -1.32
SRGAP1-202ENST00000537556 PGPA6NDG6 321 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 D6R8Y8 96 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 J3QT63 122 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 ARMS2P0C7Q2 107 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 MYCNOSP40205 109 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 UBE2D3P61077 147 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 YPEL5P62699 121 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 UBE2D2P62837 147 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 SGK494Q96LW2 274 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 CACNA1DQ01668 2161 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 C15orf61A6NNL5 157 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 CRLF1O75462 422 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 NPYP01303 97 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 CFIP05156 583 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 CCL5P13501 91 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 PAX8Q06710 450 aa6.83□□□□□ -1.32
SRGAP1-202ENST00000537556 ZNF493Q6ZR52 646 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms