RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 GNB1LQ9BYB4 327 aa12.34□□□□□ -0.43
MKS1-204ENST00000537529 IGHV7-81A0A0B4J1V7 117 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 H3BTX0 84 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 SCGB2A1O75556 95 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 HLA-DRB1P01911 266 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 MT-ND6P03923 174 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 TCL1AP56279 114 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 BPIFA4PQ86YQ2 179 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 ZNF491Q8N8L2 437 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 Q8N9W7 124 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 OR4F17Q8NGA8 305 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 TMEM18Q96B42 140 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 AJUBAQ96IF1 538 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 ZNF586Q9NXT0 402 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 POLR3KQ9Y2Y1 108 aaPredicted RBP12.33□□□□□ -0.44
MKS1-204ENST00000537529 WI2-2373I1.2A0A1W2PRP0 233 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 SNURFLB1AK76 121 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 NPFFO15130 113 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 TCRAP04437 139 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 IL4P05112 153 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 Q56UQ5 140 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 FAM120AOSQ5T036 256 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 GRAMD2BQ96HH9 432 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 GPR82Q96P67 336 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 PIMREGQ9BSJ6 248 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 C21orf62Q9NYP8 219 aa12.33□□□□□ -0.44
MKS1-204ENST00000537529 CCL19Q99731 98 aa12.32□□□□□ -0.44
MKS1-204ENST00000537529 S4R3C0 116 aa12.32□□□□□ -0.44
MKS1-204ENST00000537529 IZUMO1RA6ND01 250 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 EGR2P11161 476 aaPredicted RBP12.31□□□□□ -0.44
MKS1-204ENST00000537529 PRR27Q6MZM9 219 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 GBGT1Q8N5D6 347 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 NUDT10Q8NFP7 164 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 CMTM2Q8TAZ6 248 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 MBD6Q96DN6 1003 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 NUDT11Q96G61 164 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 C7orf69Q9H7B7 122 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 LTAP01374 205 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 AMY1AP04745 511 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 FAM168AQ92567 244 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 LRBAP50851 2863 aa12.31□□□□□ -0.44
MKS1-204ENST00000537529 TRBV19A0A075B6N1 114 aa12.3□□□□□ -0.44
MKS1-204ENST00000537529 OR2J3O76001 311 aa12.3□□□□□ -0.44
MKS1-204ENST00000537529 NDUFB8O95169 186 aa12.3□□□□□ -0.44
MKS1-204ENST00000537529 USF2Q15853 346 aaPredicted RBP12.3□□□□□ -0.44
MKS1-204ENST00000537529 NAT8BQ9UHF3 227 aa12.3□□□□□ -0.44
MKS1-204ENST00000537529 ITPR1Q14643 2758 aa12.3□□□□□ -0.44
MKS1-204ENST00000537529 F8W735 103 aaPredicted RBP12.3□□□□□ -0.44
MKS1-204ENST00000537529 SPINK4O60575 86 aa12.3□□□□□ -0.44
MKS1-204ENST00000537529 CA1P00915 261 aaPredicted RBP12.3□□□□□ -0.44
MKS1-204ENST00000537529 CRISP2P16562 243 aa12.3□□□□□ -0.44
MKS1-204ENST00000537529 TMEM136Q6ZRR5 245 aa12.3□□□□□ -0.44
MKS1-204ENST00000537529 FAM110DQ8TAY7 271 aaPredicted RBP12.3□□□□□ -0.44
MKS1-204ENST00000537529 TXN2Q99757 166 aa12.3□□□□□ -0.44
MKS1-204ENST00000537529 HLA-DQA1P01909 254 aa12.29□□□□□ -0.44
MKS1-204ENST00000537529 IGLC2P0DOY2 106 aa12.29□□□□□ -0.44
MKS1-204ENST00000537529 FCGR2BP31994 310 aaPredicted RBP12.29□□□□□ -0.44
MKS1-204ENST00000537529 SLC35B1P78383 322 aa12.29□□□□□ -0.44
MKS1-204ENST00000537529 JOSD1Q15040 202 aaPredicted RBP12.29□□□□□ -0.44
MKS1-204ENST00000537529 MRPL54Q6P161 138 aaKnown RBP12.29□□□□□ -0.44
MKS1-204ENST00000537529 LYPD1Q8N2G4 141 aa12.29□□□□□ -0.44
MKS1-204ENST00000537529 OR5R1Q8NH85 324 aa12.29□□□□□ -0.44
MKS1-204ENST00000537529 SGK494Q96LW2 274 aa12.29□□□□□ -0.44
MKS1-204ENST00000537529 HSPB9Q9BQS6 159 aa12.29□□□□□ -0.44
MKS1-204ENST00000537529 MLST8Q9BVC4 326 aa12.29□□□□□ -0.44
MKS1-204ENST00000537529 ZNF492Q9P255 531 aa12.29□□□□□ -0.44
MKS1-204ENST00000537529 FBXL7Q9UJT9 491 aa12.29□□□□□ -0.44
MKS1-204ENST00000537529 CENPVL3A0A0U1RRI6 287 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 NDUFS8O00217 210 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 FRMD6-AS1P0C7T7 363 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 PAX8Q06710 450 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 CDPF1Q6NVV7 123 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 RASL11AQ6T310 242 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 Q86TA4 180 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 EXOC3-AS1Q8N2X6 119 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 VN1R17PQ8TDU5 208 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 TSKUQ8WUA8 353 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 ZNF331Q9NQX6 463 aaPredicted RBP12.28□□□□□ -0.44
MKS1-204ENST00000537529 RELNP78509 3460 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 GRIFINA4D1Z8 144 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 RAB4BP61018 213 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 UNQ5815/PRO19632Q6UWF5 114 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 TMEM256Q8N2U0 113 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 PIP4P2Q8N4L2 257 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 C10orf105Q8TEF2 133 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 DCHS2Q6V1P9 2916 aa12.28□□□□□ -0.44
MKS1-204ENST00000537529 SPTBN1Q01082 2364 aaKnown RBP12.27□□□□□ -0.44
MKS1-204ENST00000537529 TRBV6-1A0A0K0K1D8 114 aa12.27□□□□□ -0.45
MKS1-204ENST00000537529 A0A1B0GUS0 222 aa12.27□□□□□ -0.45
MKS1-204ENST00000537529 CLEC2AQ6UVW9 174 aa12.27□□□□□ -0.45
MKS1-204ENST00000537529 GOLT1AQ6ZVE7 132 aa12.27□□□□□ -0.45
MKS1-204ENST00000537529 WIPF2Q8TF74 440 aaPredicted RBP12.27□□□□□ -0.45
MKS1-204ENST00000537529 TMUB1Q9BVT8 246 aa12.27□□□□□ -0.45
MKS1-204ENST00000537529 RPP21Q9H633 154 aaKnown RBP12.27□□□□□ -0.45
MKS1-204ENST00000537529 IGHV4-61A0A0C4DH41 118 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 OR2T8A6NH00 312 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 LINC00587B1AMM8 73 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 MRPS12O15235 138 aaKnown RBP12.26□□□□□ -0.45
MKS1-204ENST00000537529 ATP6V0E1O15342 81 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 IGHV3-23P01764 117 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms