RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RPRMLQ8N4K4 120 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 COQ2Q96H96 371 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 RAX2Q96IS3 184 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 PGPEP1Q9NXJ5 209 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 ZNF815PA8K554 130 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 HTN1P15515 57 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 DGAT2L7PQ6IED9 249 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 ZNF295-AS1Q8N0V1 137 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-213ENST00000537002 IL11RAQ14626 422 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 FGFBP3Q8TAT2 258 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 E9PLN8 166 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 SLAQ13239 276 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 ECSCRQ19T08 205 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 KRTAP27-1Q3LI81 207 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-213ENST00000537002 KLF14Q8TD94 323 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-213ENST00000537002 ITLN1Q8WWA0 313 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 NABP1Q96AH0 204 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 INSIG2Q9Y5U4 225 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 K7ERJ3 54 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 GAGE5Q13069 117 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 GAGE6Q13070 117 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 ETDBQ3ZM63 59 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 KIR3DL3Q8N743 410 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 ZNRF1Q8ND25 227 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 JMJD8Q96S16 334 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 ASCL2Q99929 193 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 TRAV8-1A0A0A6YYK1 113 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 IGHV5-10-1A0A0J9YXX1 117 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 C15orf61A6NNL5 157 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 FAM53AQ6NSI3 398 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-213ENST00000537002 CIARTQ8N365 385 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-213ENST00000537002 PCNX3Q9H6A9 2034 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 TRAV3A0A0B4J244 114 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 PMS2P5A8MQ11 134 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 KLK10O43240 276 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 EFNA2O43921 213 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 MYOD1P15172 320 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 ACP7Q6ZNF0 438 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 IGHV3-23P01764 117 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 Q6P435 159 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 ZNF497Q6ZNH5 498 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 OTORQ9NRC9 128 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 CRYGCP07315 174 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 SAA2P0DJI9 122 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-213ENST00000537002 KLF17Q5JT82 389 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-213ENST00000537002 CRIP3Q6Q6R5 217 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 LINC00479Q96M42 142 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 ATG2AQ2TAZ0 1938 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 TRAV12-3A0A0B4J271 114 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 NTF4P34130 210 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 ASIPP42127 132 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 THADAQ6YHU6 1953 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 SAA1P0DJI8 122 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-213ENST00000537002 DEFB109BQ30KR1 87 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 SYT8Q8NBV8 401 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 CHCHD2Q9Y6H1 151 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-213ENST00000537002 COL5A1P20908 1838 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-213ENST00000537002 LINC00205P59089 165 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 CCL8P80075 99 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 KHDC1LQ5JSQ8 128 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 KNL1Q8NG31 2342 aa4.42□□□□□ -1.7
PTPRD-213ENST00000537002 LOC102723996A0A087X1L8 192 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 IGHV3-35A0A0C4DH35 117 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 PPIFP30405 207 aaKnown RBP4.41□□□□□ -1.7
PTPRD-213ENST00000537002 FAM201AQ5SY85 155 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 EBLN2Q6P2I7 272 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 HES7Q9BYE0 225 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 IGHV3OR16-13A0A075B7E8 117 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 IGHV3-74A0A0B4J1X5 117 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 M0R381 172 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 RFPL3SP0C7P2 107 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 IFI27P40305 119 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-213ENST00000537002 FAM74A4Q5TZK3 123 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 CCDC144NLQ6NUI1 221 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 MRPL20Q9BYC9 149 aaKnown RBP4.41□□□□□ -1.7
PTPRD-213ENST00000537002 LINC01549A6NIU2 74 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 RNASE1P07998 156 aaKnown RBP4.41□□□□□ -1.7
PTPRD-213ENST00000537002 DLX4Q92988 240 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-213ENST00000537002 MBD6Q96DN6 1003 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 MUC22E2RYF6 1773 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-213ENST00000537002 TRAV2A0A0B4J234 112 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 IGHV3-66A0A0C4DH42 116 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 CRYBA4P53673 196 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 PHLDA3Q9Y5J5 127 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 UPK2O00526 184 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 ZNF329Q86UD4 541 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 RTTNQ86VV8 2226 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 IGHV3OR16-8A0A075B7F1 116 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 A0A1B0GXF2 115 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 C15orf62A8K5M9 175 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 SMKR1H3BMG3 65 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 H3BMG7 143 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 IGLV3-12A0A075B6K2 115 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 IGKV1-6A0A0C4DH72 117 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 LINC01619G3V211 115 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 K7EN84 100 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 IGKV1-39P01597 117 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 IGKV1D-39P04432 117 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms