RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 APOHP02749 345 aaPredicted RBP12.56□□□□□ -0.4
CHFR-213ENST00000536843 RAB9AP51151 201 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 ZNF134P52741 427 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 CD69Q07108 199 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 LGALS9BQ3B8N2 356 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 LGALS9CQ6DKI2 356 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 ASCL5Q7RTU5 278 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 FAM222BQ8WU58 562 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 TSSC4Q9Y5U2 329 aaPredicted RBP12.56□□□□□ -0.4
CHFR-213ENST00000536843 CACNA1DQ01668 2161 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 CUL9Q8IWT3 2517 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 TEX50A0A1B0GTY4 177 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 IGKV3-15P01624 115 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 DEFB109BQ30KR1 87 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 TMEM177Q53S58 311 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 TCTEX1D4Q5JR98 221 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 OR1L8Q8NGR8 309 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 INSIG2Q9Y5U4 225 aa12.56□□□□□ -0.4
CHFR-213ENST00000536843 MOSP00540 346 aa12.55□□□□□ -0.4
CHFR-213ENST00000536843 IGHV3-7P01780 117 aa12.55□□□□□ -0.4
CHFR-213ENST00000536843 CSN3P07498 182 aa12.55□□□□□ -0.4
CHFR-213ENST00000536843 LOXL3P58215 753 aa12.55□□□□□ -0.4
CHFR-213ENST00000536843 C1orf229Q6ZS94 237 aaPredicted RBP12.55□□□□□ -0.4
CHFR-213ENST00000536843 ZADH2Q8N4Q0 377 aa12.55□□□□□ -0.4
CHFR-213ENST00000536843 TIMM8BQ9Y5J9 83 aaPredicted RBP12.55□□□□□ -0.4
CHFR-213ENST00000536843 NPIPB6E9PJ23 425 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 J3QR89 54 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 COX7A2P2O60397 106 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 LTAP01374 205 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 C10orf113Q5VZT2 155 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 IGF2-ASQ6U949 168 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 OR1L4Q8NGR5 311 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 ITLN1Q8WWA0 313 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 CACNG8Q8WXS5 425 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 PRR14LQ5THK1 2151 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 RIF1Q5UIP0 2472 aaKnown RBP12.54□□□□□ -0.4
CHFR-213ENST00000536843 TIMM8AO60220 97 aaPredicted RBP12.54□□□□□ -0.4
CHFR-213ENST00000536843 FSTL3O95633 263 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 CECR9P0C854 216 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 MLANAQ16655 118 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 CR1LQ2VPA4 569 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 CCDC144NLQ6NUI1 221 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 VGLL1Q99990 258 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 CXXC4Q9H2H0 198 aa12.54□□□□□ -0.4
CHFR-213ENST00000536843 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.53□□□□□ -0.4
CHFR-213ENST00000536843 SLC25A5P05141 298 aaKnown RBP12.53□□□□□ -0.4
CHFR-213ENST00000536843 SMIM13P0DJ93 91 aa12.53□□□□□ -0.4
CHFR-213ENST00000536843 RNASE2P10153 161 aaKnown RBP12.53□□□□□ -0.4
CHFR-213ENST00000536843 CKS1BP61024 79 aa12.53□□□□□ -0.4
CHFR-213ENST00000536843 EDDM3AQ14507 147 aa12.53□□□□□ -0.4
CHFR-213ENST00000536843 RPRMLQ8N4K4 120 aa12.53□□□□□ -0.4
CHFR-213ENST00000536843 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
CHFR-213ENST00000536843 ZNF207O43670 478 aaKnown RBP12.53□□□□□ -0.4
CHFR-213ENST00000536843 GATD1Q8NB37 220 aa12.53□□□□□ -0.4
CHFR-213ENST00000536843 TMEM116Q8NCL8 245 aa12.53□□□□□ -0.4
CHFR-213ENST00000536843 C1orf162Q8NEQ5 155 aaPredicted RBP12.53□□□□□ -0.4
CHFR-213ENST00000536843 SPANXB1Q9NS25 103 aaPredicted RBP12.53□□□□□ -0.4
CHFR-213ENST00000536843 OVOL3O00110 214 aa12.52□□□□□ -0.4
CHFR-213ENST00000536843 KLK10O43240 276 aa12.52□□□□□ -0.4
CHFR-213ENST00000536843 FCGR2BP31994 310 aaPredicted RBP12.52□□□□□ -0.4
CHFR-213ENST00000536843 PATE2Q6UY27 113 aa12.52□□□□□ -0.4
CHFR-213ENST00000536843 PDPNQ86YL7 162 aa12.52□□□□□ -0.4
CHFR-213ENST00000536843 CD177Q8N6Q3 437 aa12.52□□□□□ -0.4
CHFR-213ENST00000536843 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.52□□□□□ -0.4
CHFR-213ENST00000536843 DAZAP1Q96EP5 407 aaKnown RBP12.52□□□□□ -0.4
CHFR-213ENST00000536843 SGK494Q96LW2 274 aa12.52□□□□□ -0.4
CHFR-213ENST00000536843 SIGLEC8Q9NYZ4 499 aa12.52□□□□□ -0.4
CHFR-213ENST00000536843 A0A096LNJ9 63 aa12.52□□□□□ -0.41
CHFR-213ENST00000536843 UPK2O00526 184 aa12.52□□□□□ -0.41
CHFR-213ENST00000536843 IGHV3-13P01766 116 aa12.51□□□□□ -0.41
CHFR-213ENST00000536843 ZNF788Q6ZQV5 615 aa12.51□□□□□ -0.41
CHFR-213ENST00000536843 OR5AN1Q8NGI8 311 aa12.51□□□□□ -0.41
CHFR-213ENST00000536843 DKK4Q9UBT3 224 aa12.51□□□□□ -0.41
CHFR-213ENST00000536843 IGHV1-18A0A0C4DH31 117 aa12.51□□□□□ -0.41
CHFR-213ENST00000536843 F8W1H4 67 aa12.51□□□□□ -0.41
CHFR-213ENST00000536843 DLL1O00548 723 aa12.51□□□□□ -0.41
CHFR-213ENST00000536843 PRSS3P2Q8NHM4 247 aa12.51□□□□□ -0.41
CHFR-213ENST00000536843 GVINP1Q7Z2Y8 2422 aa12.5□□□□□ -0.41
CHFR-213ENST00000536843 TRAV26-1A0A087WT03 109 aa12.5□□□□□ -0.41
CHFR-213ENST00000536843 PGPA6NDG6 321 aa12.5□□□□□ -0.41
CHFR-213ENST00000536843 GCSAMQ8N6F7 178 aa12.5□□□□□ -0.41
CHFR-213ENST00000536843 STXBP6Q8NFX7 210 aa12.5□□□□□ -0.41
CHFR-213ENST00000536843 OR8A1Q8NGG7 326 aa12.5□□□□□ -0.41
CHFR-213ENST00000536843 BLNKQ8WV28 456 aa12.5□□□□□ -0.41
CHFR-213ENST00000536843 ZNF48Q96MX3 618 aaPredicted RBP12.5□□□□□ -0.41
CHFR-213ENST00000536843 PROCRQ9UNN8 238 aa12.5□□□□□ -0.41
CHFR-213ENST00000536843 IGLV1-44P01699 117 aa12.5□□□□□ -0.41
CHFR-213ENST00000536843 SAA2P0DJI9 122 aaPredicted RBP12.5□□□□□ -0.41
CHFR-213ENST00000536843 SLC25A48Q6ZT89 311 aaKnown RBP12.5□□□□□ -0.41
CHFR-213ENST00000536843 SEM1Q6ZVN7 128 aa12.5□□□□□ -0.41
CHFR-213ENST00000536843 ZNF71Q9NQZ8 489 aaPredicted RBP12.5□□□□□ -0.41
CHFR-213ENST00000536843 CNOT1A5YKK6 2376 aaKnown RBP12.5□□□□□ -0.41
CHFR-213ENST00000536843 PRDX2P32119 198 aa12.49□□□□□ -0.41
CHFR-213ENST00000536843 CRYBA4P53673 196 aa12.49□□□□□ -0.41
CHFR-213ENST00000536843 PCP2Q8IVA1 136 aa12.49□□□□□ -0.41
CHFR-213ENST00000536843 MRAP2Q96G30 205 aa12.49□□□□□ -0.41
CHFR-213ENST00000536843 ZFHX4Q86UP3 3567 aa12.49□□□□□ -0.41
CHFR-213ENST00000536843 A0A1B0GUT8 65 aa12.49□□□□□ -0.41
CHFR-213ENST00000536843 CT45A6P0DMU7 189 aa12.49□□□□□ -0.41
CHFR-213ENST00000536843 CT45A5P0DMU8 189 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms