RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 RPP21Q9H633 154 aaKnown RBP12.77□□□□□ -0.37
CHMP1A-202ENST00000535997 TMEM14CQ9P0S9 112 aa12.77□□□□□ -0.37
CHMP1A-202ENST00000535997 ZNF492Q9P255 531 aa12.77□□□□□ -0.37
CHMP1A-202ENST00000535997 A0A1B0GXF2 115 aa12.76□□□□□ -0.37
CHMP1A-202ENST00000535997 VWC2LB2RUY7 222 aa12.76□□□□□ -0.37
CHMP1A-202ENST00000535997 LY6LH3BQJ8 138 aa12.76□□□□□ -0.37
CHMP1A-202ENST00000535997 ALKBH7Q9BT30 221 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-202ENST00000535997 C19orf71A6NCJ1 209 aa12.76□□□□□ -0.37
CHMP1A-202ENST00000535997 I3L2K1 104 aa12.76□□□□□ -0.37
CHMP1A-202ENST00000535997 K7ENP7 123 aa12.76□□□□□ -0.37
CHMP1A-202ENST00000535997 C3orf79P0CE67 100 aa12.76□□□□□ -0.37
CHMP1A-202ENST00000535997 LEMD1Q68G75 181 aa12.76□□□□□ -0.37
CHMP1A-202ENST00000535997 FAM19A2Q8N3H0 131 aa12.76□□□□□ -0.37
CHMP1A-202ENST00000535997 SOX21Q9Y651 276 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-202ENST00000535997 P01737 135 aa12.75□□□□□ -0.37
CHMP1A-202ENST00000535997 COX7A1P24310 79 aa12.75□□□□□ -0.37
CHMP1A-202ENST00000535997 CAMPP49913 170 aa12.75□□□□□ -0.37
CHMP1A-202ENST00000535997 PRB3Q04118 309 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-202ENST00000535997 MMDQ15546 238 aa12.75□□□□□ -0.37
CHMP1A-202ENST00000535997 TMEM190Q8WZ59 177 aa12.75□□□□□ -0.37
CHMP1A-202ENST00000535997 GFRA4Q9GZZ7 299 aa12.75□□□□□ -0.37
CHMP1A-202ENST00000535997 GSX1Q9H4S2 264 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-202ENST00000535997 OTORQ9NRC9 128 aa12.75□□□□□ -0.37
CHMP1A-202ENST00000535997 RPH3ALQ9UNE2 315 aa12.75□□□□□ -0.37
CHMP1A-202ENST00000535997 TLN1Q9Y490 2541 aaKnown RBP12.75□□□□□ -0.37
CHMP1A-202ENST00000535997 CTRLP40313 264 aa12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 LINC00322Q6ZN03 302 aaPredicted RBP12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 LINC01560Q8TB33 94 aa12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 DAZAP1Q96EP5 407 aaKnown RBP12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 RASL11BQ9BPW5 248 aa12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 SLC25A39Q9BZJ4 359 aaPredicted RBP12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 WNT10AQ9GZT5 417 aa12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 FAM231BA6NCW3 169 aa12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 HSBP1O75506 76 aa12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 LYZP61626 148 aa12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 HBBP68871 147 aa12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 PLGLAQ15195 96 aa12.74□□□□□ -0.37
CHMP1A-202ENST00000535997 LIPFP07098 398 aa12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 NTF3P20783 257 aa12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 FBXL19-AS1Q494R0 122 aa12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 LY6G5BQ8NDX9 201 aa12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 SSBP4Q9BWG4 385 aaPredicted RBP12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 RNF24Q9Y225 148 aa12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 DCHS1Q96JQ0 3298 aa12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 TCF24Q7RTU0 167 aa12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 OR8B3Q8NGG8 313 aa12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 OR8B2Q96RD0 313 aa12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 MUC6Q6W4X9 2439 aa12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 ZZEF1O43149 2961 aa12.73□□□□□ -0.37
CHMP1A-202ENST00000535997 H3BTX0 84 aa12.72□□□□□ -0.37
CHMP1A-202ENST00000535997 CNIH1O95406 144 aa12.72□□□□□ -0.37
CHMP1A-202ENST00000535997 IGKV1-17P01599 117 aa12.72□□□□□ -0.37
CHMP1A-202ENST00000535997 GPR6P46095 362 aaPredicted RBP12.72□□□□□ -0.37
CHMP1A-202ENST00000535997 ZNF672Q499Z4 452 aaPredicted RBP12.72□□□□□ -0.37
CHMP1A-202ENST00000535997 SPATA45Q537H7 98 aa12.72□□□□□ -0.37
CHMP1A-202ENST00000535997 FAM162BQ5T6X4 162 aa12.72□□□□□ -0.37
CHMP1A-202ENST00000535997 OR2D3Q8NGH3 330 aa12.72□□□□□ -0.37
CHMP1A-202ENST00000535997 GTSF1Q8WW33 167 aa12.72□□□□□ -0.37
CHMP1A-202ENST00000535997 TACC2O95359 2948 aa12.72□□□□□ -0.37
CHMP1A-202ENST00000535997 NPIPB6E9PJ23 425 aa12.71□□□□□ -0.37
CHMP1A-202ENST00000535997 HTR1DP28221 377 aa12.71□□□□□ -0.37
CHMP1A-202ENST00000535997 PMCHL1Q16048 86 aa12.71□□□□□ -0.37
CHMP1A-202ENST00000535997 RBPMS2Q6ZRY4 209 aaKnown RBP12.71□□□□□ -0.37
CHMP1A-202ENST00000535997 ABCA4P78363 2273 aa12.71□□□□□ -0.38
CHMP1A-202ENST00000535997 ANKHD1Q8IWZ3 2542 aaKnown RBP12.71□□□□□ -0.38
CHMP1A-202ENST00000535997 TRBV6-1A0A0K0K1D8 114 aa12.71□□□□□ -0.38
CHMP1A-202ENST00000535997 TIMM23O14925 209 aa12.71□□□□□ -0.38
CHMP1A-202ENST00000535997 OR11H6Q8NGC7 330 aa12.71□□□□□ -0.38
CHMP1A-202ENST00000535997 SCNM1Q9BWG6 230 aa12.71□□□□□ -0.38
CHMP1A-202ENST00000535997 DPM3Q9P2X0 92 aa12.71□□□□□ -0.38
CHMP1A-202ENST00000535997 ONECUT1Q9UBC0 465 aa12.71□□□□□ -0.38
CHMP1A-202ENST00000535997 K7EIM0 57 aa12.7□□□□□ -0.38
CHMP1A-202ENST00000535997 M0R2Z0 102 aa12.7□□□□□ -0.38
CHMP1A-202ENST00000535997 IGLV2-11P01706 119 aa12.7□□□□□ -0.38
CHMP1A-202ENST00000535997 RPLP1P05386 114 aaKnown RBP12.7□□□□□ -0.38
CHMP1A-202ENST00000535997 HOXB4P17483 251 aaPredicted RBP12.7□□□□□ -0.38
CHMP1A-202ENST00000535997 FOXC1Q12948 553 aa12.7□□□□□ -0.38
CHMP1A-202ENST00000535997 BPIFA4PQ86YQ2 179 aa12.7□□□□□ -0.38
CHMP1A-202ENST00000535997 KLHDC1Q8N7A1 406 aa12.7□□□□□ -0.38
CHMP1A-202ENST00000535997 UQCR10Q9UDW1 63 aa12.7□□□□□ -0.38
CHMP1A-202ENST00000535997 FAM181BA6NEQ2 426 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 SIAH2O43255 324 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 COL8A1P27658 744 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 LDLRAD2Q5SZI1 272 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 Q86TA4 180 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 PGLYRP4Q96LB8 373 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 SHANK2-AS3Q9BTD1 123 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 CEP295Q9C0D2 2601 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 IGLC2P0DOY2 106 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 IGLC3P0DOY3 106 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 FOXA3P55318 350 aaPredicted RBP12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 RNASEKQ6P5S7 137 aaKnown RBP12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 LYPD1Q8N2G4 141 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 EXOC3-AS1Q8N2X6 119 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 PTPRQQ9UMZ3 2332 aa12.69□□□□□ -0.38
CHMP1A-202ENST00000535997 TRBV19A0A075B6N1 114 aa12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 NBR2O15453 112 aa12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 BTF3P20290 206 aaKnown RBP12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 CEACAM3P40198 252 aa12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 ZNF124Q15973 351 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms