RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 GAFA1Q96PS6 74 aa12.85□□□□□ -0.35
MCF2L-232ENST00000535094 IGHV2-26A0A0B4J1V2 119 aa12.85□□□□□ -0.35
MCF2L-232ENST00000535094 CD59P13987 128 aa12.85□□□□□ -0.35
MCF2L-232ENST00000535094 CSN1S1P47710 185 aa12.85□□□□□ -0.35
MCF2L-232ENST00000535094 RBPMS2Q6ZRY4 209 aaKnown RBP12.85□□□□□ -0.35
MCF2L-232ENST00000535094 FAM167A-AS1Q96KT0 104 aa12.85□□□□□ -0.35
MCF2L-232ENST00000535094 IGF2BP2-AS1Q96M15 143 aa12.85□□□□□ -0.35
MCF2L-232ENST00000535094 RASL11BQ9BPW5 248 aa12.85□□□□□ -0.35
MCF2L-232ENST00000535094 LIPFP07098 398 aa12.84□□□□□ -0.35
MCF2L-232ENST00000535094 RIPPLY3P57055 190 aa12.84□□□□□ -0.35
MCF2L-232ENST00000535094 PATE2Q6UY27 113 aa12.84□□□□□ -0.35
MCF2L-232ENST00000535094 TEX45Q8NA69 505 aa12.84□□□□□ -0.35
MCF2L-232ENST00000535094 C5orf17Q8NAS9 161 aa12.84□□□□□ -0.35
MCF2L-232ENST00000535094 C18orf15Q96N68 181 aa12.84□□□□□ -0.35
MCF2L-232ENST00000535094 INSIG2Q9Y5U4 225 aa12.84□□□□□ -0.35
MCF2L-232ENST00000535094 IGHV1-24A0A0C4DH33 117 aa12.84□□□□□ -0.35
MCF2L-232ENST00000535094 K7EQM0 130 aa12.84□□□□□ -0.35
MCF2L-232ENST00000535094 FCER1GP30273 86 aa12.84□□□□□ -0.35
MCF2L-232ENST00000535094 RPL24P83731 157 aaKnown RBP12.84□□□□□ -0.35
MCF2L-232ENST00000535094 PPIAL4EA0A075B759 164 aa12.83□□□□□ -0.35
MCF2L-232ENST00000535094 PPIAL4FP0DN26 164 aa12.83□□□□□ -0.35
MCF2L-232ENST00000535094 SLC25A48Q6ZT89 311 aaKnown RBP12.83□□□□□ -0.35
MCF2L-232ENST00000535094 FBXL15Q9H469 300 aa12.83□□□□□ -0.35
MCF2L-232ENST00000535094 ANKHD1Q8IWZ3 2542 aaKnown RBP12.83□□□□□ -0.35
MCF2L-232ENST00000535094 H0YJW9 148 aa12.83□□□□□ -0.36
MCF2L-232ENST00000535094 OR4F17Q8NGA8 305 aa12.83□□□□□ -0.36
MCF2L-232ENST00000535094 ZNF474Q6S9Z5 364 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-232ENST00000535094 LINC00322Q6ZN03 302 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-232ENST00000535094 C1orf162Q8NEQ5 155 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-232ENST00000535094 TMEM108Q6UXF1 575 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 A0A1W2PPI3 338 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 CNTFRP26992 372 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 SMIM15Q7Z3B0 74 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 SPATA12Q7Z6I5 190 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 FXYD5Q96DB9 178 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 PLSCR4Q9NRQ2 329 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 IGLC7A0M8Q6 106 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 SP9P0CG40 484 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 FCGR2BP31994 310 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-232ENST00000535094 GPR183P32249 361 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 RIGQ13278 110 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 PNKDQ8N490 385 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 NDUFA4L2Q9NRX3 87 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 DMXL2Q8TDJ6 3036 aa12.82□□□□□ -0.36
MCF2L-232ENST00000535094 RPEQ96AT9 228 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 THYN1Q9P016 225 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 ATRXP46100 2492 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 A0A1B0GUT8 65 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 C7orf71A4D174 169 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 M0R3E3 92 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 TCRAP04437 139 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 TIMM23BQ5SRD1 257 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 TMEM200BQ69YZ2 307 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 IGFBPL1Q8WX77 278 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 LYNX1G3V0Z9 82 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 H3BUT2 72 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 ARMS2P0C7Q2 107 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 LYNX1P0DP58 116 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 SAPCD1Q5SSQ6 148 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 LYPD2Q6UXB3 125 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 ZFHX4Q86UP3 3567 aa12.81□□□□□ -0.36
MCF2L-232ENST00000535094 K7ERU9 68 aa12.8□□□□□ -0.36
MCF2L-232ENST00000535094 AARDQ4LEZ3 155 aa12.8□□□□□ -0.36
MCF2L-232ENST00000535094 RITA1Q96K30 269 aa12.8□□□□□ -0.36
MCF2L-232ENST00000535094 SPRY4Q9C004 299 aa12.8□□□□□ -0.36
MCF2L-232ENST00000535094 ST20Q9HBF5 79 aa12.8□□□□□ -0.36
MCF2L-232ENST00000535094 LINC00312Q9Y6C7 94 aa12.8□□□□□ -0.36
MCF2L-232ENST00000535094 C2orf70A6NJV1 201 aa12.8□□□□□ -0.36
MCF2L-232ENST00000535094 CD40P25942 277 aa12.8□□□□□ -0.36
MCF2L-232ENST00000535094 VWC2LB2RUY7 222 aa12.8□□□□□ -0.36
MCF2L-232ENST00000535094 WT1P19544 449 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-232ENST00000535094 KLK10O43240 276 aa12.79□□□□□ -0.36
MCF2L-232ENST00000535094 IGHV3-23P01764 117 aa12.79□□□□□ -0.36
MCF2L-232ENST00000535094 PSG9Q00887 426 aa12.79□□□□□ -0.36
MCF2L-232ENST00000535094 KLF17Q5JT82 389 aaPredicted RBP12.79□□□□□ -0.36
MCF2L-232ENST00000535094 ZNF788Q6ZQV5 615 aa12.79□□□□□ -0.36
MCF2L-232ENST00000535094 GTSF1Q8WW33 167 aa12.79□□□□□ -0.36
MCF2L-232ENST00000535094 CST9LQ9H4G1 147 aa12.79□□□□□ -0.36
MCF2L-232ENST00000535094 ARHGAP32A7KAX9 2087 aa12.79□□□□□ -0.36
MCF2L-232ENST00000535094 M0R296 226 aa12.79□□□□□ -0.36
MCF2L-232ENST00000535094 PRSS1P07477 247 aa12.79□□□□□ -0.36
MCF2L-232ENST00000535094 OR10AG1Q8NH19 301 aa12.79□□□□□ -0.36
MCF2L-232ENST00000535094 CDX4O14627 284 aaPredicted RBP12.78□□□□□ -0.36
MCF2L-232ENST00000535094 IL4P05112 153 aa12.78□□□□□ -0.36
MCF2L-232ENST00000535094 ONECUT1Q9UBC0 465 aa12.78□□□□□ -0.36
MCF2L-232ENST00000535094 GAGE12BA1L429 117 aa12.78□□□□□ -0.36
MCF2L-232ENST00000535094 IGLV1-44P01699 117 aa12.78□□□□□ -0.36
MCF2L-232ENST00000535094 CFHR2P36980 270 aa12.78□□□□□ -0.36
MCF2L-232ENST00000535094 MEGF9Q9H1U4 602 aa12.78□□□□□ -0.36
MCF2L-232ENST00000535094 ORM1P02763 201 aa12.78□□□□□ -0.36
MCF2L-232ENST00000535094 CACNG7P62955 275 aa12.78□□□□□ -0.36
MCF2L-232ENST00000535094 BVES-AS1Q5T3Y7 98 aa12.78□□□□□ -0.36
MCF2L-232ENST00000535094 CFAP47Q6ZTR5 3102 aa12.77□□□□□ -0.36
MCF2L-232ENST00000535094 SMKR1H3BMG3 65 aa12.77□□□□□ -0.36
MCF2L-232ENST00000535094 PRRG2O14669 202 aa12.77□□□□□ -0.36
MCF2L-232ENST00000535094 PRSS57Q6UWY2 283 aa12.77□□□□□ -0.36
MCF2L-232ENST00000535094 C17orf77Q96MU5 243 aa12.77□□□□□ -0.36
MCF2L-232ENST00000535094 AAMDCQ9H7C9 122 aa12.77□□□□□ -0.36
MCF2L-232ENST00000535094 TRAV30A0A087WSZ9 112 aa12.77□□□□□ -0.37
MCF2L-232ENST00000535094 GCSHP23434 173 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms