RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 AP2S1P53680 142 aaPredicted RBP-1□□□□□ -2.57
COPB1-212ENST00000534771 DSCR4P56555 118 aaPredicted RBP-1□□□□□ -2.57
COPB1-212ENST00000534771 HBA1P69905 142 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 TSNQ15631 228 aaKnown RBP-1□□□□□ -2.57
COPB1-212ENST00000534771 BATFQ16520 125 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 DEFB109BQ30KR1 87 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 NKAIN1Q4KMZ8 207 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 LINC00299Q6ZSB3 139 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 RIBC1Q8N443 379 aaPredicted RBP-1□□□□□ -2.57
COPB1-212ENST00000534771 OR10AG1Q8NH19 301 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 WFDC5Q8TCV5 224 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 ZNF75CPQ92670 426 aaPredicted RBP-1□□□□□ -2.57
COPB1-212ENST00000534771 LINC00467Q9BRT7 94 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 DERL2Q9GZP9 239 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 MS4A6AQ9H2W1 248 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 TTC41PQ6P2S7 1318 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 CFAP46Q8IYW2 2715 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 DCCP43146 1447 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 RIMBP3CA6NJZ7 1639 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 RIMBP3BA6NNM3 1639 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 NHSL1Q5SYE7 1610 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 RIMBP3Q9UFD9 1639 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 PRKDCP78527 4128 aaKnown RBP-1.01□□□□□ -2.57
COPB1-212ENST00000534771 DNAH1Q9P2D7 4330 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 E7EUB6 86 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 H0YIV9 168 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 BUB1B-PAK6H3BSN5 160 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 PIRO00625 290 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 FADS2O95864 444 aaKnown RBP-1.01□□□□□ -2.57
COPB1-212ENST00000534771 CD79AP11912 226 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 S100A4P26447 101 aaKnown RBP-1.01□□□□□ -2.57
COPB1-212ENST00000534771 KCNJ3P48549 501 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 CDC34P49427 236 aaPredicted RBP-1.01□□□□□ -2.57
COPB1-212ENST00000534771 TNNC1P63316 161 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 EIF3IQ13347 325 aaKnown RBP-1.01□□□□□ -2.57
COPB1-212ENST00000534771 SYCP1Q15431 976 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 XAF1Q6GPH4 301 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 C8orf74Q6P047 294 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 LPCAT3Q6P1A2 487 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 Q8IYB0 196 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 ST13P4Q8IZP2 240 aaPredicted RBP-1.01□□□□□ -2.57
COPB1-212ENST00000534771 DEFB125Q8N687 156 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 SLC30A7Q8NEW0 376 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 CCDC124Q96CT7 223 aaKnown RBP-1.01□□□□□ -2.57
COPB1-212ENST00000534771 DIRAS2Q96HU8 199 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 DHRS9Q9BPW9 319 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 SLC25A21Q9BQT8 299 aaPredicted RBP-1.01□□□□□ -2.57
COPB1-212ENST00000534771 PRR15LQ9BU68 103 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 UBAP1Q9NZ09 502 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 UTP11Q9Y3A2 253 aaKnown RBP-1.01□□□□□ -2.57
COPB1-212ENST00000534771 RFX7Q2KHR2 1363 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 SOGA1O94964 1423 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 TANC1Q9C0D5 1861 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 PTPRDP23468 1912 aa-1.01□□□□□ -2.57
COPB1-212ENST00000534771 CNOT1A5YKK6 2376 aaKnown RBP-1.01□□□□□ -2.57
COPB1-212ENST00000534771 DPRXA6NFQ7 191 aa-1.02□□□□□ -2.57
COPB1-212ENST00000534771 PDE6GP18545 87 aa-1.02□□□□□ -2.57
COPB1-212ENST00000534771 EVI2AP22794 236 aa-1.02□□□□□ -2.57
COPB1-212ENST00000534771 YPEL3P61236 119 aaPredicted RBP-1.02□□□□□ -2.57
COPB1-212ENST00000534771 ZNHIT3Q15649 155 aaPredicted RBP-1.02□□□□□ -2.57
COPB1-212ENST00000534771 ARHGEF28Q8N1W1 1705 aaKnown RBP-1.02□□□□□ -2.57
COPB1-212ENST00000534771 TMEM161BQ8NDZ6 487 aa-1.02□□□□□ -2.57
COPB1-212ENST00000534771 SLAMF6Q96DU3 332 aa-1.02□□□□□ -2.57
COPB1-212ENST00000534771 PACRGQ96M98 296 aaPredicted RBP-1.02□□□□□ -2.57
COPB1-212ENST00000534771 HIST1H2BLQ99880 126 aa-1.02□□□□□ -2.57
COPB1-212ENST00000534771 AKAP9Q99996 3911 aa-1.02□□□□□ -2.57
COPB1-212ENST00000534771 LIMD2Q9BT23 127 aa-1.02□□□□□ -2.57
COPB1-212ENST00000534771 CCDC94Q9BW85 323 aaPredicted RBP-1.02□□□□□ -2.57
COPB1-212ENST00000534771 MYLKQ15746 1914 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 COL24A1Q17RW2 1714 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 BIVM-ERCC5R4GMW8 1640 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 SACSQ9NZJ4 4579 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 A0A087X0T9 212 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 A6NN06 94 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 FTCDNL1E5RQL4 147 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 SULT1C4O75897 302 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 HLA-DRAP01903 254 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 IL3P08700 152 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 SPRR2EP22531 72 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 PPIBP23284 216 aaKnown RBP-1.03□□□□□ -2.57
COPB1-212ENST00000534771 DYNLT1P63172 113 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 XIAPP98170 497 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 SPAG11BQ08648 103 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 ZNF56Q15929 161 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 OR52R1Q8NGF1 315 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 OR5L1Q8NGL2 311 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 LRRC20Q8TCA0 184 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 TOMM6Q96B49 74 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 MALSU1Q96EH3 234 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 NIPSNAP1Q9BPW8 284 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 GGACTQ9BVM4 153 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 C11orf68Q9H3H3 251 aaKnown RBP-1.03□□□□□ -2.57
COPB1-212ENST00000534771 C1orf109Q9NX04 203 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 LY96Q9Y6Y9 160 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 CADP27708 2225 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 FREM3P0C091 2139 aa-1.03□□□□□ -2.57
COPB1-212ENST00000534771 VPS13BQ7Z7G8 4022 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 A0A087WSZ3 146 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 A0A1B0GV50 99 aa-1.04□□□□□ -2.58
COPB1-212ENST00000534771 PSMD12O00232 456 aaPredicted RBP-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms