RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	KDM4D	Q6B0I6	523 aa		2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	DCXR	Q7Z4W1	244 aa		2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	RBM45	Q8IUH3	476 aa	Known RBP	2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	GRPEL2	Q8TAA5	225 aa		2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	SLAMF6	Q96DU3	332 aa		2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	TEAD3	Q99594	435 aa		2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	SDHC	Q99643	169 aa	Predicted RBP	2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	MAP1LC3C	Q9BXW4	147 aa		2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	KRTAP4-1	Q9BYQ7	146 aa		2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	C8orf17	Q9NRJ1	99 aa		2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	ZNF230	Q9UIE0	474 aa	Predicted RBP	2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	PUS1	Q9Y606	427 aa	Known RBP eCLIP	2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	TMEM14A	Q9Y6G1	99 aa		2.58	□□□□□ -2
ECHDC1-223	ENST00000534442	PQLC2L	A1A4F0	135 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	FAM223B	A6NKX1	122 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	FAM25E	A8MYX2	175 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	EFCAB9	A8MZ26	197 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	PPP5D1	E7EU14	171 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	RBFOX2	O43251	390 aa	Known RBP eCLIP	2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	ADAP1	O75689	374 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	NRAS	P01111	189 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	GCG	P01275	180 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	HLA-DQA1	P01909	254 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	CSN2	P05814	226 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	TAS2R41	P59536	307 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	TAS2R31	P59538	309 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	ATP5G2	Q06055	141 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	FXYD3	Q14802	87 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	ATP6V1F	Q16864	119 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	RNASE13	Q5GAN3	156 aa	Known RBP	2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	FAM222A	Q5U5X8	452 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	FAM223A	Q8IWN6	122 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442		Q8IYB0	196 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	UBAC2	Q8NBM4	344 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	RXFP4	Q8TDU9	374 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	GHSR	Q92847	366 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	KCNS1	Q96KK3	526 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	COA4	Q9NYJ1	87 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	DNAJC27	Q9NZQ0	273 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	SNX24	Q9Y343	169 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442	KLF12	Q9Y4X4	402 aa		2.57	□□□□□ -2
ECHDC1-223	ENST00000534442		A0A087WUU8	490 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	ZNF593	O00488	134 aa	Predicted RBP	2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	TAAR5	O14804	337 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	SLC22A1	O15245	554 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	PLIN3	O60664	434 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	ZNF324	O75467	553 aa	Predicted RBP	2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	MED6	O75586	246 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	OR2H2	O95918	312 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	CA2	P00918	260 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	HTR2C	P28335	458 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	PHB	P35232	272 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	HCCS	P53701	268 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	RHOG	P84095	191 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	TMEM236	Q5W0B7	351 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	KRTAP5-10	Q6L8G5	202 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	KRTAP5-7	Q6L8G8	165 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	GPR32P1	Q8NGA4	272 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	OR4D11	Q8NGI4	311 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	OR6K6	Q8NGW6	343 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	CENPN	Q96H22	339 aa	Predicted RBP	2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	ZNF436	Q9C0F3	470 aa	Predicted RBP	2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	ARV1	Q9H2C2	271 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	EXOSC4	Q9NPD3	245 aa	Known RBP	2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	FAM206A	Q9NX38	181 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	AP3M1	Q9Y2T2	418 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	IER3IP1	Q9Y5U9	82 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442		V9GYQ6	96 aa		2.56	□□□□□ -2
ECHDC1-223	ENST00000534442	MEIKIN	A0A087WXM9	373 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	SMIM9	A6NGZ8	99 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	ENTPD6	O75354	484 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	PYCR1	P32322	319 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	OPRK1	P41145	380 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	MAGEA2	P43356	314 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	DAD1	P61803	113 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442		Q3ZCU0	254 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	TEX30	Q5JUR7	227 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	EPGN	Q6UW88	154 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	SLC25A26	Q70HW3	274 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	LGI3	Q8N145	548 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442		Q8N814	137 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	LZIC	Q8WZA0	190 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	GTF2H4	Q92759	462 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	GPX7	Q96SL4	187 aa	Predicted RBP	2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	NMNAT3	Q96T66	252 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	SULT4A1	Q9BR01	284 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	UFC1	Q9Y3C8	167 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	MRPS16	Q9Y3D3	137 aa	Known RBP	2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	RFNG	Q9Y644	331 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442		V9GYY9	64 aa		2.55	□□□□□ -2
ECHDC1-223	ENST00000534442	IGKV2D-24	A0A075B6R9	120 aa		2.54	□□□□□ -2
ECHDC1-223	ENST00000534442	IGHV3OR16-8	A0A075B7F1	116 aa		2.54	□□□□□ -2
ECHDC1-223	ENST00000534442	DHRS12	A0PJE2	317 aa		2.54	□□□□□ -2
ECHDC1-223	ENST00000534442	TVP23A	A6NH52	213 aa		2.54	□□□□□ -2
ECHDC1-223	ENST00000534442		F5H768	121 aa		2.54	□□□□□ -2
ECHDC1-223	ENST00000534442		K7EN84	100 aa		2.54	□□□□□ -2
ECHDC1-223	ENST00000534442		M0QX08	132 aa		2.54	□□□□□ -2
ECHDC1-223	ENST00000534442	SDCBP	O00560	298 aa	Predicted RBP	2.54	□□□□□ -2
ECHDC1-223	ENST00000534442	CDC42EP2	O14613	210 aa		2.54	□□□□□ -2
ECHDC1-223	ENST00000534442	CCNK	O75909	580 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms