RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 GGTLC1Q9BX51 225 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 C21orf62Q9NYP8 219 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 KIAA1109Q2LD37 5005 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 CXorf65A6NEN9 183 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 ZFP92A6NM28 416 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 CLN5O75503 358 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 LINC00869P0C866 280 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 RPL29P47914 159 aaKnown RBP8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 NPBWR1P48145 328 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 SULT1A2P50226 295 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 SERF2P84101 59 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 C15orf32Q32M92 178 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 FFAR4Q5NUL3 377 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 MIC13Q5XKP0 118 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 CYP2G1PQ6ZSU1 146 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 ZNF502Q8TBZ5 544 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 PCNPQ8WW12 178 aaKnown RBP8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 CXorf58Q96LI9 332 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 TRGV9Q99603 122 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 IGHV4OR15-8A0A075B7B6 117 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 A0A087WW49 117 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 FAM223BA6NKX1 122 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 UMAD1C9J7I0 102 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 LGALS1P09382 135 aaKnown RBP8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 IGLC1P0CG04 106 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 MED14OSP0DP75 135 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 GATA2P23769 480 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 ELLP55199 621 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 TPPP2P59282 170 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 RAB14P61106 215 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 PRR20EP86478 221 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 PRR20CP86479 221 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 PRR20DP86480 221 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 PRR20BP86481 221 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 PRR20AP86496 221 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 ZNF90Q03938 601 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 TIGITQ495A1 244 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 Q56UQ5 140 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 AKR1C8PQ5T2L2 129 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 LINC00322Q6ZN03 302 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 FAM223AQ8IWN6 122 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 BPIFCQ8NFQ6 507 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 RNF141Q8WVD5 230 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 EEF1AKMT3Q96AZ1 226 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 USMG5Q96IX5 58 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 TXN2Q99757 166 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 VSIRQ9H7M9 311 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 PXMP4Q9Y6I8 212 aa8.53□□□□□ -1.04
TRAPPC4-213ENST00000533149 TRAV30A0A087WSZ9 112 aa8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 A0A0G2JLM5 398 aa8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 F8W735 103 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 GNG7O60262 68 aa8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 YIF1AO95070 293 aa8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 IGKV1-17P01599 117 aa8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 HSPB1P04792 205 aaKnown RBP8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 CLEC3BP05452 202 aa8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 RAB5CP51148 216 aa8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 KCNIP2Q9NS61 270 aa8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 RPRMQ9NS64 109 aa8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 SLC39A9Q9NUM3 307 aa8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 KLK5Q9Y337 293 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC4-213ENST00000533149 TRBV7-1A0A0A6YYK4 115 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 OR2T8A6NH00 312 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 ZNF705EA8MWA4 302 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 MBP02144 154 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 CTSGP08311 255 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 FCGR2BP31994 310 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 FHITP49789 147 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 RAB2AP61019 212 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 B2MP61769 119 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 SELENOTP62341 195 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 ACOT6Q3I5F7 207 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 TMEM41BQ5BJD5 291 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 GCSAMLQ5JQS6 135 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 CLLU1Q5K131 121 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 CEMP1Q6PRD7 247 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 CLEC19AQ6UXS0 136 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 STPG3Q8N7X2 389 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 OR10G4Q8NGN3 311 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 OR10G9Q8NGN4 311 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 OR10G7Q8NGN6 311 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 FAM213BQ8TBF2 198 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 LRRC20Q8TCA0 184 aa8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 SAT2Q96F10 170 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-213ENST00000533149 IGHV3-11P01762 117 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 FABP1P07148 127 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 NMBP08949 121 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 RD3LP0DJH9 198 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 M6PRP20645 277 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 GPR183P32249 361 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 YPEL3P61236 119 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 BLOC1S1P78537 153 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 PMS2P11Q13670 270 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 LGALS9CQ6DKI2 356 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 LCN12Q6JVE5 192 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 DPPA3Q6W0C5 159 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 Q6ZRG5 221 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 CCDC140Q96MF4 163 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 CHRDL1Q9BU40 450 aa8.5□□□□□ -1.05
TRAPPC4-213ENST00000533149 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms