RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 PMS2P5A8MQ11 134 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HIST1H2BKO60814 126 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HIST1H2BJP06899 126 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 SELLP14151 372 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HIST1H2BOP23527 126 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HIST1H2BBP33778 126 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HIST1H2BDP58876 126 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HIST1H2BCP62807 126 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HIST2H2BEQ16778 126 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HIST1H2BHQ93079 126 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 IFI27L1Q96BM0 104 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HIST1H2BNQ99877 126 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HIST1H2BMQ99879 126 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 OVOL2Q9BRP0 275 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 TMEM238C9JI98 176 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 H3BUT2 72 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 PSCAO43653 123 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 EXOC3-AS1Q8N2X6 119 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 FNDC1Q4ZHG4 1894 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-219ENST00000528621 IGKV1D-17A0A075B6S4 117 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 HAPLN4Q86UW8 402 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 C1QTNF4Q9BXJ3 329 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 SIGLEC9Q9Y336 463 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 TRAV8-4A0A0B4J246 113 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 NPIPB5A8MRT5 1133 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 PDE6HQ13956 83 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 ZNF329Q86UD4 541 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 TMEM86BQ8N661 226 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 CHCHD5Q9BSY4 110 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 MRPL27Q9P0M9 148 aaKnown RBP6.93□□□□□ -1.3
CTNND1-219ENST00000528621 GZMBP10144 247 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 COL8A2P25067 703 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 C10orf55Q5SWW7 151 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 AMBPP02760 352 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 LYZL1Q6UWQ5 148 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 C3orf56Q8N813 242 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 TMEM75Q8N9X5 138 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 H3BUX3 64 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 RPRMLQ8N4K4 120 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 C11orf44Q8N8P7 122 aa6.93□□□□□ -1.3
CTNND1-219ENST00000528621 D6R8Y8 96 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 VCYO14598 125 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 INSP01308 110 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 RASL10AQ92737 203 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 NHP2Q9NX24 153 aaKnown RBP6.92□□□□□ -1.3
CTNND1-219ENST00000528621 ANAPC10Q9UM13 185 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 MSRB2Q9Y3D2 182 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 LINC00473A8K010 186 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 TNFSF13O75888 250 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 GATA4P43694 442 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 TMEM95Q3KNT9 176 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 LYPD2Q6UXB3 125 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 COL4A6Q14031 1691 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 C5orf63A6NC05 138 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 LINC01551Q86U37 167 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 HIST3H2BBQ8N257 126 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 CRIM1Q9NZV1 1036 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 IGHV3-73A0A0B4J1V6 119 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 HGFACQ04756 655 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 IGFL3Q6UXB1 125 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 BRD3OSQ6XYD6 125 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 ATG2BQ96BY7 2078 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 E9PQ18 207 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 NDUFB8O95169 186 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 NDPQ00604 133 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 SRSF6Q13247 344 aaKnown RBP6.92□□□□□ -1.3
CTNND1-219ENST00000528621 ZNF492Q9P255 531 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 PIKFYVEQ9Y2I7 2098 aa6.92□□□□□ -1.3
CTNND1-219ENST00000528621 IGHV3-64A0A075B6Q5 118 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 TRAV12-3A0A0B4J271 114 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 RNASE2P10153 161 aaKnown RBP6.91□□□□□ -1.3
CTNND1-219ENST00000528621 FXYD7P58549 80 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 CKS1BP61024 79 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 RPL36AP83881 106 aaKnown RBP6.91□□□□□ -1.3
CTNND1-219ENST00000528621 DMRTA1Q5VZB9 504 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 LCN12Q6JVE5 192 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 FAM110DQ8TAY7 271 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-219ENST00000528621 RPL36ALQ969Q0 106 aaKnown RBP6.91□□□□□ -1.3
CTNND1-219ENST00000528621 SHANK2-AS3Q9BTD1 123 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 FNDC4Q9H6D8 234 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-219ENST00000528621 RLFQ13129 1914 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 COLCA2A8K830 154 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 M0R2P5 195 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 CXCL1P09341 107 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 RPL35AP18077 110 aaKnown RBP6.91□□□□□ -1.3
CTNND1-219ENST00000528621 PRTN3P24158 256 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 LMO1P25800 156 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 LINC00158P58513 81 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 C11orf68Q9H3H3 251 aaKnown RBP6.91□□□□□ -1.3
CTNND1-219ENST00000528621 RFNGQ9Y644 331 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 SELENOKQ9Y6D0 94 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 TANC1Q9C0D5 1861 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 TRAV8-2A0A0B4J237 113 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 ATXN8Q156A1 80 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 PIP4P2Q8N4L2 257 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 C15orf62A8K5M9 175 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 ZNF474Q6S9Z5 364 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-219ENST00000528621 TEX43Q6ZNM6 134 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms