RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 INPP1P49441 399 aa7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 FXYD7P58549 80 aa7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 ACOT7LQ6ZUV0 252 aa7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 RPP25LQ8N5L8 163 aaKnown RBP7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 C20orf173Q96LM9 149 aa7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 LINC00052Q96N35 136 aa7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 MFFQ9GZY8 342 aa7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 XCL2Q9UBD3 114 aa7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 TBC1D24Q9ULP9 559 aa7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 STRAPQ9Y3F4 350 aaKnown RBP7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 HLA-DRB4X5D2U9 266 aa7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 F6UB75 175 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 DEDDO75618 318 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 IGKV3-20P01619 116 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 HLA-DMBP28068 263 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 NUP62P37198 522 aaPredicted RBP7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 RPP30P78346 268 aaKnown RBP7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 PRR20EP86478 221 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 PRR20CP86479 221 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 PRR20DP86480 221 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 PRR20BP86481 221 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 PRR20AP86496 221 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 OR8I2Q8N0Y5 310 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 COQ8AQ8NI60 647 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 SMIM8Q96KF7 97 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 C7orf50Q9BRJ6 194 aaKnown RBP7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 SLC25A32Q9H2D1 315 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 HRH4Q9H3N8 390 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 SAV1Q9H4B6 383 aaPredicted RBP7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 PSENENQ9NZ42 101 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 CELA1Q9UNI1 258 aa7.52□□□□□ -1.21
PRPF40B-204ENST00000527253 ZNF98A6NK75 572 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 SSSCA1O60232 199 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 ORM2P19652 201 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 PSMB3P49720 205 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 ARL16Q0P5N6 197 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 C4orf46Q504U0 113 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 LGALS9CQ6DKI2 356 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 TMEM14EPQ6UXP3 125 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 Q6ZTC4 211 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 ZNF767PQ75MW2 155 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 TMEM144Q7Z5S9 345 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 ZNF709Q8N972 641 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 ZBTB8BQ8NAP8 495 aaPredicted RBP7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 C2CD4CQ8TF44 421 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 MITD1Q8WV92 249 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 PPP1R14BQ96C90 147 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 RSG1Q9BU20 258 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 SLC25A22Q9H936 323 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 PFDN2Q9UHV9 154 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 APLNQ9ULZ1 77 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 KMT2AQ03164 3969 aa7.51□□□□□ -1.21
PRPF40B-204ENST00000527253 TRAV8-2A0A0B4J237 113 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 CENPXA8MT69 81 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 ISLRO14498 428 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 CFDP00746 253 aaPredicted RBP7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 IFNA21P01568 189 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 METTL15P1P0C7V9 234 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 ID1P41134 155 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 AKR1C1Q04828 323 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 IAH1Q2TAA2 248 aaPredicted RBP7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 C12orf74Q32Q52 190 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 IGFL4Q6B9Z1 124 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 ZNF705AQ6ZN79 300 aaPredicted RBP7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 FOXI2Q6ZQN5 318 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 CYP2G1PQ6ZSU1 146 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 BPIFCQ8NFQ6 507 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 OR1B1Q8NGR6 318 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 CLUHP3Q96NS8 147 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 SCRT1Q9BWW7 348 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 SLC35B3Q9H1N7 401 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 DOK5Q9P104 306 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 SLC45A2Q9UMX9 530 aa7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 RCL1Q9Y2P8 373 aaKnown RBP7.5□□□□□ -1.21
PRPF40B-204ENST00000527253 A0A0J9YX75 114 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 SMCO3A2RU48 225 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 ZNF705FA8MVS1 300 aaPredicted RBP7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 IGLL5B9A064 214 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 H3BRN7 92 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 CCSO14618 274 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 LYRM1O43325 122 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 SCGB1D2O95969 90 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 MBPP02686 304 aaPredicted RBP7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 TCRBP04435 133 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 ZNF705DP0CH99 300 aaPredicted RBP7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 ZNF705BP0CI00 300 aaPredicted RBP7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 NUTF2P61970 127 aaKnown RBP7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 RRAS2P62070 204 aaPredicted RBP7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 DLK1P80370 383 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 FAM78BQ5VT40 261 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 PATE2Q6UY27 113 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 OR4B1Q8NGF8 309 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 C16orf92Q96LL3 132 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 TMEM147Q9BVK8 224 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 C1QTNF4Q9BXJ3 329 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 C20orf85Q9H1P6 137 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 GSKIPQ9P0R6 139 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 VPS13DQ5THJ4 4388 aa7.49□□□□□ -1.21
PRPF40B-204ENST00000527253 TRAV6A0A075B6T7 132 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms