RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 S100A7P31151 101 aa15.91■□□□□ 0.14
SMCO4-203ENST00000526869 RPL15P61313 204 aaKnown RBP15.91■□□□□ 0.14
SMCO4-203ENST00000526869 SLC35B1P78383 322 aa15.91■□□□□ 0.14
SMCO4-203ENST00000526869 SLC25A39Q9BZJ4 359 aaPredicted RBP15.91■□□□□ 0.14
SMCO4-203ENST00000526869 RNF24Q9Y225 148 aa15.91■□□□□ 0.14
SMCO4-203ENST00000526869 H3BRN7 92 aa15.9■□□□□ 0.14
SMCO4-203ENST00000526869 APOC3P02656 99 aa15.9■□□□□ 0.14
SMCO4-203ENST00000526869 PSMB8P28062 276 aa15.9■□□□□ 0.14
SMCO4-203ENST00000526869 CD81P60033 236 aa15.9■□□□□ 0.14
SMCO4-203ENST00000526869 RELQ04864 619 aaPredicted RBP15.9■□□□□ 0.14
SMCO4-203ENST00000526869 TMEM95Q3KNT9 176 aa15.9■□□□□ 0.14
SMCO4-203ENST00000526869 SOHLH1Q5JUK2 328 aa15.9■□□□□ 0.14
SMCO4-203ENST00000526869 CLEC19AQ6UXS0 136 aa15.9■□□□□ 0.14
SMCO4-203ENST00000526869 SHANK2-AS3Q9BTD1 123 aa15.9■□□□□ 0.14
SMCO4-203ENST00000526869 PAXXQ9BUH6 204 aa15.9■□□□□ 0.14
SMCO4-203ENST00000526869 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.89■□□□□ 0.13
SMCO4-203ENST00000526869 TRAV5A0A0B4J249 113 aa15.89■□□□□ 0.13
SMCO4-203ENST00000526869 PDE6DO43924 150 aa15.89■□□□□ 0.13
SMCO4-203ENST00000526869 SRD5A1P18405 259 aa15.89■□□□□ 0.13
SMCO4-203ENST00000526869 RAB9AP51151 201 aa15.89■□□□□ 0.13
SMCO4-203ENST00000526869 UBE2L3P68036 154 aaKnown RBP15.89■□□□□ 0.13
SMCO4-203ENST00000526869 FOXE3Q13461 319 aa15.89■□□□□ 0.13
SMCO4-203ENST00000526869 CCDC28AQ8IWP9 274 aa15.89■□□□□ 0.13
SMCO4-203ENST00000526869 SVBPQ8N300 66 aa15.89■□□□□ 0.13
SMCO4-203ENST00000526869 CYB561D1Q8N8Q1 229 aa15.89■□□□□ 0.13
SMCO4-203ENST00000526869 ZNF414Q96IQ9 312 aa15.89■□□□□ 0.13
SMCO4-203ENST00000526869 OR51M1Q9H341 326 aa15.89■□□□□ 0.13
SMCO4-203ENST00000526869 TMEM14CQ9P0S9 112 aa15.89■□□□□ 0.13
SMCO4-203ENST00000526869 SONP18583 2426 aaKnown RBP15.89■□□□□ 0.13
SMCO4-203ENST00000526869 C11orf94C9JXX5 98 aa15.88■□□□□ 0.13
SMCO4-203ENST00000526869 ELANEP08246 267 aa15.88■□□□□ 0.13
SMCO4-203ENST00000526869 USF2Q15853 346 aaPredicted RBP15.88■□□□□ 0.13
SMCO4-203ENST00000526869 ZNF343Q6P1L6 599 aa15.88■□□□□ 0.13
SMCO4-203ENST00000526869 ZNF418Q8TF45 676 aaPredicted RBP15.88■□□□□ 0.13
SMCO4-203ENST00000526869 KLK15Q9H2R5 256 aa15.88■□□□□ 0.13
SMCO4-203ENST00000526869 PUS1Q9Y606 427 aaKnown RBP eCLIP15.88■□□□□ 0.13
SMCO4-203ENST00000526869 A0A1W2PRE2 83 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 FAM74A7A6NL05 159 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 F6UZH7 168 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 BMPR1BO00238 502 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 GP9P14770 177 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 UBE2G2P60604 165 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 TEX38Q6PEX7 206 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 RNF152Q8N8N0 203 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 OR4F5Q8NH21 305 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 FXYD5Q96DB9 178 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 DUX5Q96PT3 197 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 OR4F4Q96R69 305 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 ZFAND3Q9H8U3 227 aa15.87■□□□□ 0.13
SMCO4-203ENST00000526869 YTHDF2Q9Y5A9 579 aaKnown RBP15.87■□□□□ 0.13
SMCO4-203ENST00000526869 ANK3Q12955 4377 aaKnown RBP15.87■□□□□ 0.13
SMCO4-203ENST00000526869 RNASE1P07998 156 aaKnown RBP15.86■□□□□ 0.13
SMCO4-203ENST00000526869 CD99P14209 185 aa15.86■□□□□ 0.13
SMCO4-203ENST00000526869 CST9LP1Q5W188 147 aa15.86■□□□□ 0.13
SMCO4-203ENST00000526869 FAM90A2PQ658T7 463 aa15.86■□□□□ 0.13
SMCO4-203ENST00000526869 TOMM20LQ6UXN7 152 aa15.86■□□□□ 0.13
SMCO4-203ENST00000526869 MYOZ3Q8TDC0 251 aa15.86■□□□□ 0.13
SMCO4-203ENST00000526869 TMEM190Q8WZ59 177 aa15.86■□□□□ 0.13
SMCO4-203ENST00000526869 SMR3AQ99954 134 aa15.86■□□□□ 0.13
SMCO4-203ENST00000526869 NKX6-2Q9C056 277 aaPredicted RBP15.86■□□□□ 0.13
SMCO4-203ENST00000526869 ESM1Q9NQ30 184 aa15.86■□□□□ 0.13
SMCO4-203ENST00000526869 SERTAD4Q9NUC0 356 aa15.86■□□□□ 0.13
SMCO4-203ENST00000526869 RABAC1Q9UI14 185 aa15.86■□□□□ 0.13
SMCO4-203ENST00000526869 OR10J4P0C629 311 aa15.85■□□□□ 0.13
SMCO4-203ENST00000526869 ARL3P36405 182 aa15.85■□□□□ 0.13
SMCO4-203ENST00000526869 GUCA2BQ16661 112 aa15.85■□□□□ 0.13
SMCO4-203ENST00000526869 FAM74A3Q4VXF1 159 aa15.85■□□□□ 0.13
SMCO4-203ENST00000526869 GNB4Q9HAV0 340 aa15.85■□□□□ 0.13
SMCO4-203ENST00000526869 SNAPINO95295 136 aa15.84■□□□□ 0.13
SMCO4-203ENST00000526869 PYYP10082 97 aa15.84■□□□□ 0.13
SMCO4-203ENST00000526869 ATP5G3P48201 142 aa15.84■□□□□ 0.13
SMCO4-203ENST00000526869 HILS1P60008 231 aa15.84■□□□□ 0.13
SMCO4-203ENST00000526869 ZNF329Q86UD4 541 aa15.84■□□□□ 0.13
SMCO4-203ENST00000526869 OR4X2Q8NGF9 303 aa15.84■□□□□ 0.13
SMCO4-203ENST00000526869 FAM181BA6NEQ2 426 aa15.83■□□□□ 0.12
SMCO4-203ENST00000526869 ZNF98A6NK75 572 aa15.83■□□□□ 0.12
SMCO4-203ENST00000526869 KIAA0141Q14154 515 aaPredicted RBP15.83■□□□□ 0.12
SMCO4-203ENST00000526869 BPIFA4PQ86YQ2 179 aa15.83■□□□□ 0.12
SMCO4-203ENST00000526869 C11orf52Q96A22 123 aa15.83■□□□□ 0.12
SMCO4-203ENST00000526869 JMJD8Q96S16 334 aa15.83■□□□□ 0.12
SMCO4-203ENST00000526869 TCEAL7Q9BRU2 100 aa15.83■□□□□ 0.12
SMCO4-203ENST00000526869 HIVEP2P31629 2446 aa15.82■□□□□ 0.12
SMCO4-203ENST00000526869 NDUFA4O00483 81 aa15.82■□□□□ 0.12
SMCO4-203ENST00000526869 HIST1H1EP10412 219 aaKnown RBP15.82■□□□□ 0.12
SMCO4-203ENST00000526869 Q6ZSV7 163 aa15.82■□□□□ 0.12
SMCO4-203ENST00000526869 PPP5D1E7EU14 171 aa15.81■□□□□ 0.12
SMCO4-203ENST00000526869 NBEAP1P0C6P0 100 aa15.81■□□□□ 0.12
SMCO4-203ENST00000526869 CEBPGP53567 150 aa15.81■□□□□ 0.12
SMCO4-203ENST00000526869 LEMD1Q68G75 181 aa15.81■□□□□ 0.12
SMCO4-203ENST00000526869 NIPSNAP3BQ9BS92 247 aa15.81■□□□□ 0.12
SMCO4-203ENST00000526869 GGTLC3B5MD39 225 aa15.8■□□□□ 0.12
SMCO4-203ENST00000526869 MRPS12O15235 138 aaKnown RBP15.8■□□□□ 0.12
SMCO4-203ENST00000526869 GGCTO75223 188 aaKnown RBP15.8■□□□□ 0.12
SMCO4-203ENST00000526869 IGHV3-11P01762 117 aa15.8■□□□□ 0.12
SMCO4-203ENST00000526869 LCNL1Q6ZST4 164 aa15.8■□□□□ 0.12
SMCO4-203ENST00000526869 CLRN3Q8NCR9 226 aa15.8■□□□□ 0.12
SMCO4-203ENST00000526869 OR4F17Q8NGA8 305 aa15.8■□□□□ 0.12
SMCO4-203ENST00000526869 C16orf95Q9H693 158 aa15.8■□□□□ 0.12
SMCO4-203ENST00000526869 PEF1Q9UBV8 284 aaKnown RBP15.8■□□□□ 0.12
SMCO4-203ENST00000526869 CLPSL1A2RUU4 121 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms