RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 CLN5O75503 358 aa10.2□□□□□ -0.78
CPSF1-201ENST00000526271 NXPH3O95157 252 aa10.2□□□□□ -0.78
CPSF1-201ENST00000526271 CD5P06127 495 aa10.2□□□□□ -0.78
CPSF1-201ENST00000526271 SPP1P10451 314 aa10.2□□□□□ -0.78
CPSF1-201ENST00000526271 RPL11P62913 178 aaKnown RBP10.2□□□□□ -0.78
CPSF1-201ENST00000526271 ID3Q02535 119 aa10.2□□□□□ -0.78
CPSF1-201ENST00000526271 IL15RAQ13261 267 aa10.2□□□□□ -0.78
CPSF1-201ENST00000526271 MORN3Q6PF18 240 aaPredicted RBP10.2□□□□□ -0.78
CPSF1-201ENST00000526271 ZBTB8BQ8NAP8 495 aaPredicted RBP10.2□□□□□ -0.78
CPSF1-201ENST00000526271 OR1S1Q8NH92 325 aa10.2□□□□□ -0.78
CPSF1-201ENST00000526271 RAB40CQ96S21 281 aa10.2□□□□□ -0.78
CPSF1-201ENST00000526271 IFNA17P01571 189 aa10.19□□□□□ -0.78
CPSF1-201ENST00000526271 SNCAP37840 140 aa10.19□□□□□ -0.78
CPSF1-201ENST00000526271 NPBWR1P48145 328 aa10.19□□□□□ -0.78
CPSF1-201ENST00000526271 IAH1Q2TAA2 248 aaPredicted RBP10.19□□□□□ -0.78
CPSF1-201ENST00000526271 OR4X1Q8NH49 305 aa10.19□□□□□ -0.78
CPSF1-201ENST00000526271 C2orf50Q96LR7 162 aa10.19□□□□□ -0.78
CPSF1-201ENST00000526271 PDCD10Q9BUL8 212 aa10.19□□□□□ -0.78
CPSF1-201ENST00000526271 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
CPSF1-201ENST00000526271 C5orf51A6NDU8 294 aa10.18□□□□□ -0.78
CPSF1-201ENST00000526271 FAM25EA8MYX2 175 aa10.18□□□□□ -0.78
CPSF1-201ENST00000526271 GOSR2O14653 212 aa10.18□□□□□ -0.78
CPSF1-201ENST00000526271 IGLC1P0CG04 106 aa10.18□□□□□ -0.78
CPSF1-201ENST00000526271 NPPCP23582 126 aa10.18□□□□□ -0.78
CPSF1-201ENST00000526271 USF2Q15853 346 aaPredicted RBP10.18□□□□□ -0.78
CPSF1-201ENST00000526271 GDF5OSQ5U4N7 250 aa10.18□□□□□ -0.78
CPSF1-201ENST00000526271 C16orf54Q6UWD8 224 aa10.18□□□□□ -0.78
CPSF1-201ENST00000526271 MED28Q9H204 178 aa10.18□□□□□ -0.78
CPSF1-201ENST00000526271 H3BMM0 161 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 SCGB2A1O75556 95 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 SIX6O95475 246 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 CXCL3P19876 107 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 NKX2-1P43699 371 aaPredicted RBP10.17□□□□□ -0.78
CPSF1-201ENST00000526271 SUB1P53999 127 aaKnown RBP eCLIP10.17□□□□□ -0.78
CPSF1-201ENST00000526271 H2BFSP57053 126 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 RRAS2P62070 204 aaPredicted RBP10.17□□□□□ -0.78
CPSF1-201ENST00000526271 FCN2Q15485 313 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 PSMG4Q5JS54 123 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 OR11H7Q8NGC8 314 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 NMES1Q9C002 83 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 RBKSQ9H477 322 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 GSKIPQ9P0R6 139 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 XCL2Q9UBD3 114 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 MGAT4CQ9UBM8 478 aa10.17□□□□□ -0.78
CPSF1-201ENST00000526271 CORTO00230 105 aa10.16□□□□□ -0.78
CPSF1-201ENST00000526271 SYNGR2O43760 224 aa10.16□□□□□ -0.78
CPSF1-201ENST00000526271 MED6O75586 246 aa10.16□□□□□ -0.78
CPSF1-201ENST00000526271 LGALS9BQ3B8N2 356 aa10.16□□□□□ -0.78
CPSF1-201ENST00000526271 TMEM41BQ5BJD5 291 aa10.16□□□□□ -0.78
CPSF1-201ENST00000526271 PRSS54Q6PEW0 395 aa10.16□□□□□ -0.78
CPSF1-201ENST00000526271 ZNF705AQ6ZN79 300 aaPredicted RBP10.16□□□□□ -0.78
CPSF1-201ENST00000526271 METTL26Q96S19 204 aa10.16□□□□□ -0.78
CPSF1-201ENST00000526271 ENY2Q9NPA8 101 aa10.16□□□□□ -0.78
CPSF1-201ENST00000526271 IGLV2-18A0A075B6J9 118 aa10.15□□□□□ -0.78
CPSF1-201ENST00000526271 CEBPZOSA8MTT3 80 aa10.15□□□□□ -0.78
CPSF1-201ENST00000526271 ZNF705FA8MVS1 300 aaPredicted RBP10.15□□□□□ -0.78
CPSF1-201ENST00000526271 MBPP02686 304 aaPredicted RBP10.15□□□□□ -0.78
CPSF1-201ENST00000526271 ZNF705DP0CH99 300 aaPredicted RBP10.15□□□□□ -0.78
CPSF1-201ENST00000526271 ZNF705BP0CI00 300 aaPredicted RBP10.15□□□□□ -0.78
CPSF1-201ENST00000526271 POLR2GP62487 172 aaKnown RBP eCLIP10.15□□□□□ -0.78
CPSF1-201ENST00000526271 CYCSP99999 105 aaKnown RBP10.15□□□□□ -0.78
CPSF1-201ENST00000526271 DTD1Q8TEA8 209 aa10.15□□□□□ -0.78
CPSF1-201ENST00000526271 MAGT1Q9H0U3 335 aa10.15□□□□□ -0.78
CPSF1-201ENST00000526271 A0A1W2PS18 150 aa10.14□□□□□ -0.79
CPSF1-201ENST00000526271 P0DMU3 169 aa10.14□□□□□ -0.79
CPSF1-201ENST00000526271 FAM231AP0DMU4 169 aa10.14□□□□□ -0.79
CPSF1-201ENST00000526271 FAM231CP0DMU5 169 aa10.14□□□□□ -0.79
CPSF1-201ENST00000526271 OPRK1P41145 380 aa10.14□□□□□ -0.79
CPSF1-201ENST00000526271 HOXA1P49639 335 aaPredicted RBP10.14□□□□□ -0.79
CPSF1-201ENST00000526271 PAX9P55771 341 aa10.14□□□□□ -0.79
CPSF1-201ENST00000526271 FXYD7P58549 80 aa10.14□□□□□ -0.79
CPSF1-201ENST00000526271 ZNF709Q8N972 641 aa10.14□□□□□ -0.79
CPSF1-201ENST00000526271 TMEM231Q9H6L2 316 aa10.14□□□□□ -0.79
CPSF1-201ENST00000526271 HEYLQ9NQ87 328 aaPredicted RBP10.14□□□□□ -0.79
CPSF1-201ENST00000526271 U3KQ87 197 aa10.14□□□□□ -0.79
CPSF1-201ENST00000526271 HERC1Q15751 4861 aa10.14□□□□□ -0.79
CPSF1-201ENST00000526271 HELTA6NFD8 242 aa10.13□□□□□ -0.79
CPSF1-201ENST00000526271 K7EPK0 472 aa10.13□□□□□ -0.79
CPSF1-201ENST00000526271 BUB3O43684 328 aa10.13□□□□□ -0.79
CPSF1-201ENST00000526271 HTR2BP41595 481 aa10.13□□□□□ -0.79
CPSF1-201ENST00000526271 RND2P52198 227 aa10.13□□□□□ -0.79
CPSF1-201ENST00000526271 ATP5IP56385 69 aaPredicted RBP10.13□□□□□ -0.79
CPSF1-201ENST00000526271 C2orf83Q53S99 150 aa10.13□□□□□ -0.79
CPSF1-201ENST00000526271 ASB13Q8WXK3 278 aa10.13□□□□□ -0.79
CPSF1-201ENST00000526271 SMIM8Q96KF7 97 aa10.13□□□□□ -0.79
CPSF1-201ENST00000526271 CIB3Q96Q77 187 aaPredicted RBP10.13□□□□□ -0.79
CPSF1-201ENST00000526271 NDUFAF3Q9BU61 184 aa10.13□□□□□ -0.79
CPSF1-201ENST00000526271 C11orf1Q9H5F2 150 aa10.13□□□□□ -0.79
CPSF1-201ENST00000526271 RCL1Q9Y2P8 373 aaKnown RBP10.13□□□□□ -0.79
CPSF1-201ENST00000526271 WRBO00258 174 aa10.12□□□□□ -0.79
CPSF1-201ENST00000526271 SOCS3O14543 225 aa10.12□□□□□ -0.79
CPSF1-201ENST00000526271 SCGB1D2O95969 90 aa10.12□□□□□ -0.79
CPSF1-201ENST00000526271 HNRNPCP07910 306 aaKnown RBP eCLIP10.12□□□□□ -0.79
CPSF1-201ENST00000526271 HLA-DRB4P13762 266 aa10.12□□□□□ -0.79
CPSF1-201ENST00000526271 TAS2R30P59541 319 aa10.12□□□□□ -0.79
CPSF1-201ENST00000526271 RAB32Q13637 225 aa10.12□□□□□ -0.79
CPSF1-201ENST00000526271 CHAC2Q8WUX2 184 aa10.12□□□□□ -0.79
CPSF1-201ENST00000526271 C17orf77Q96MU5 243 aa10.12□□□□□ -0.79
CPSF1-201ENST00000526271 NEU1Q99519 415 aa10.12□□□□□ -0.79
CPSF1-201ENST00000526271 DKK2Q9UBU2 259 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms