RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 OR52E5Q8NH55 327 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 NDUFAF3Q9BU61 184 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 MCRIP2Q9BUT9 160 aaKnown RBP3.44□□□□□ -1.86
USP48-211ENST00000526044 ENY2Q9NPA8 101 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 COA4Q9NYJ1 87 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 MBD2Q9UBB5 411 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 ZNF257Q9Y2Q1 563 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 OTOGQ6ZRI0 2925 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 CREBBPQ92793 2442 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 CSPG4Q6UVK1 2322 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 IGHV7-81A0A0B4J1V7 117 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 C15orf61A6NNL5 157 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 CEBPZOSA8MTT3 80 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 E7EUB6 86 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 SIVA1O15304 175 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 RLN2P04090 185 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 GP9P14770 177 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 CXCL3P19876 107 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 PSMB6P28072 239 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 SUB1P53999 127 aaKnown RBP eCLIP3.43□□□□□ -1.86
USP48-211ENST00000526044 H2BFSP57053 126 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 PRCDQ00LT1 54 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 AKIRIN2Q53H80 203 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 SAPCD1Q5SSQ6 148 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 UNQ5815/PRO19632Q6UWF5 114 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 HSD17B13Q7Z5P4 300 aaPredicted RBP3.43□□□□□ -1.86
USP48-211ENST00000526044 LFNGQ8NES3 379 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 OR5T1Q8NG75 326 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 OR11H7Q8NGC8 314 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 OR11H4Q8NGC9 324 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 OR4D5Q8NGN0 318 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 OR4F5Q8NH21 305 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 OR5B3Q8NH48 314 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 SGMS2Q8NHU3 365 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 GRPEL2Q8TAA5 225 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 SRSF12Q8WXF0 261 aaKnown RBP3.43□□□□□ -1.86
USP48-211ENST00000526044 ASB13Q8WXK3 278 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 TMEM37Q8WXS4 190 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 ARPC1AQ92747 370 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 PINX1Q96BK5 328 aaKnown RBP3.43□□□□□ -1.86
USP48-211ENST00000526044 HSPB9Q9BQS6 159 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 FAM103A1Q9BTL3 118 aaKnown RBP3.43□□□□□ -1.86
USP48-211ENST00000526044 NMES1Q9C002 83 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 ZNF436Q9C0F3 470 aaPredicted RBP3.43□□□□□ -1.86
USP48-211ENST00000526044 RBKSQ9H477 322 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 PLEKHA3Q9HB20 300 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 PARP11Q9NR21 331 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 NDUFA4L2Q9NRX3 87 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 TMEM14BQ9NUH8 114 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 LINC00527Q9UJ94 153 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 WSB1Q9Y6I7 421 aa3.43□□□□□ -1.86
USP48-211ENST00000526044 FLNAP21333 2647 aaKnown RBP3.43□□□□□ -1.86
USP48-211ENST00000526044 FLNBO75369 2602 aaKnown RBP3.42□□□□□ -1.86
USP48-211ENST00000526044 ACANP16112 2415 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 TRAV41A0A0B4J266 112 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 A0A1B0GVG6 124 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 SMCO3A2RU48 225 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 CLPSL1A2RUU4 121 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 INS-IGF2F8WCM5 200 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 G3V318 75 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 SMLR1H3BR10 107 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 CYB5BO43169 146 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 SYNGR2O43760 224 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 NDUFA7O95182 113 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 IGF1P05019 195 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 APELAP0DMC3 54 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 OR13C7P0DN81 318 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 DEFA4P12838 97 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 PVALBP20472 110 aaPredicted RBP3.42□□□□□ -1.86
USP48-211ENST00000526044 SNCAP37840 140 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 ID1P41134 155 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 VDAC2P45880 294 aaPredicted RBP3.42□□□□□ -1.86
USP48-211ENST00000526044 CDC34P49427 236 aaPredicted RBP3.42□□□□□ -1.86
USP48-211ENST00000526044 PLP1P60201 277 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 POLR2GP62487 172 aaKnown RBP eCLIP3.42□□□□□ -1.86
USP48-211ENST00000526044 SLC35B1P78383 322 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 EWSR1Q01844 656 aaKnown RBP eCLIP3.42□□□□□ -1.86
USP48-211ENST00000526044 TNFRSF9Q07011 255 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 IL15RAQ13261 267 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 LRRC37A5PQ49AS3 106 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 SPINK9Q5DT21 86 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 C10orf55Q5SWW7 151 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 Q8N2B8 174 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 STPG2Q8N412 459 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 TTC9CQ8N5M4 171 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 OR10W1Q8NGF6 305 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 OR9G4Q8NGQ1 327 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 DTD1Q8TEA8 209 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 TAF15Q92804 592 aaKnown RBP eCLIP3.42□□□□□ -1.86
USP48-211ENST00000526044 SMIM8Q96KF7 97 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 NOL4LQ96MY1 436 aaPredicted RBP3.42□□□□□ -1.86
USP48-211ENST00000526044 CIB3Q96Q77 187 aaPredicted RBP3.42□□□□□ -1.86
USP48-211ENST00000526044 C16orf95Q9H693 158 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 ZNF702PQ9H963 129 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 ZNF355PQ9NSJ1 428 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 PSENENQ9NZ42 101 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 RPH3ALQ9UNE2 315 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 LSM5Q9Y4Y9 91 aaKnown RBP3.42□□□□□ -1.86
USP48-211ENST00000526044 U3KQ87 197 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms