RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 PFDN2Q9UHV9 154 aa8.95□□□□□ -0.98
VEGFA-223ENST00000523125 HLA-DRB4X5D2U9 266 aa8.95□□□□□ -0.98
VEGFA-223ENST00000523125 PMS2P5A8MQ11 134 aa8.94□□□□□ -0.98
VEGFA-223ENST00000523125 PLA2G10O15496 165 aa8.94□□□□□ -0.98
VEGFA-223ENST00000523125 GATA2P23769 480 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-223ENST00000523125 PAX9P55771 341 aa8.94□□□□□ -0.98
VEGFA-223ENST00000523125 OR4D5Q8NGN0 318 aa8.94□□□□□ -0.98
VEGFA-223ENST00000523125 XCL2Q9UBD3 114 aa8.94□□□□□ -0.98
VEGFA-223ENST00000523125 TBC1D24Q9ULP9 559 aa8.94□□□□□ -0.98
VEGFA-223ENST00000523125 STRAPQ9Y3F4 350 aaKnown RBP8.94□□□□□ -0.98
VEGFA-223ENST00000523125 CFDP00746 253 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-223ENST00000523125 PSMB3P49720 205 aa8.93□□□□□ -0.98
VEGFA-223ENST00000523125 ACOT7LQ6ZUV0 252 aa8.93□□□□□ -0.98
VEGFA-223ENST00000523125 OR8I2Q8N0Y5 310 aa8.93□□□□□ -0.98
VEGFA-223ENST00000523125 COQ8AQ8NI60 647 aa8.93□□□□□ -0.98
VEGFA-223ENST00000523125 LINC00052Q96N35 136 aa8.93□□□□□ -0.98
VEGFA-223ENST00000523125 C7orf50Q9BRJ6 194 aaKnown RBP8.93□□□□□ -0.98
VEGFA-223ENST00000523125 SAV1Q9H4B6 383 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-223ENST00000523125 ZNF98A6NK75 572 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 ISLRO14498 428 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 SSSCA1O60232 199 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 CCNKO75909 580 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 IFNA21P01568 189 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 HLA-DMBP28068 263 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 ID1P41134 155 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 NUTF2P61970 127 aaKnown RBP8.92□□□□□ -0.98
VEGFA-223ENST00000523125 C4orf46Q504U0 113 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 LGALS9CQ6DKI2 356 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 TMEM144Q7Z5S9 345 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 RPP25LQ8N5L8 163 aaKnown RBP8.92□□□□□ -0.98
VEGFA-223ENST00000523125 C2CD4CQ8TF44 421 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 MITD1Q8WV92 249 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 PPP1R14BQ96C90 147 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 SMIM8Q96KF7 97 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 C20orf173Q96LM9 149 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 CLUHP3Q96NS8 147 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 C1QTNF4Q9BXJ3 329 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 SLC25A32Q9H2D1 315 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 PSENENQ9NZ42 101 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 SLC45A2Q9UMX9 530 aa8.92□□□□□ -0.98
VEGFA-223ENST00000523125 CENPXA8MT69 81 aa8.91□□□□□ -0.98
VEGFA-223ENST00000523125 IGKV3-20P01619 116 aa8.91□□□□□ -0.98
VEGFA-223ENST00000523125 ORM2P19652 201 aa8.91□□□□□ -0.98
VEGFA-223ENST00000523125 AKR1C1Q04828 323 aa8.91□□□□□ -0.98
VEGFA-223ENST00000523125 TMEM14EPQ6UXP3 125 aa8.91□□□□□ -0.98
VEGFA-223ENST00000523125 ZNF705AQ6ZN79 300 aaPredicted RBP8.91□□□□□ -0.98
VEGFA-223ENST00000523125 FOXI2Q6ZQN5 318 aa8.91□□□□□ -0.98
VEGFA-223ENST00000523125 ZNF709Q8N972 641 aa8.91□□□□□ -0.98
VEGFA-223ENST00000523125 BPIFCQ8NFQ6 507 aa8.91□□□□□ -0.98
VEGFA-223ENST00000523125 APLNQ9ULZ1 77 aa8.91□□□□□ -0.98
VEGFA-223ENST00000523125 CELA1Q9UNI1 258 aa8.91□□□□□ -0.98
VEGFA-223ENST00000523125 ZNF705FA8MVS1 300 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-223ENST00000523125 C11orf94C9JXX5 98 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 F6UB75 175 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 DEDDO75618 318 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 ZNF705DP0CH99 300 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-223ENST00000523125 ZNF705BP0CI00 300 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-223ENST00000523125 FXYD7P58549 80 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 IAH1Q2TAA2 248 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-223ENST00000523125 CNPY1Q3B7I2 92 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 CYP2G1PQ6ZSU1 146 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 Q6ZTC4 211 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 ZBTB8BQ8NAP8 495 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-223ENST00000523125 RSG1Q9BU20 258 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 SCRT1Q9BWW7 348 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 C20orf85Q9H1P6 137 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 SLC25A22Q9H936 323 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 NDUFA13Q9P0J0 144 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 RCL1Q9Y2P8 373 aaKnown RBP8.9□□□□□ -0.98
VEGFA-223ENST00000523125 DNAH6Q9C0G6 4158 aa8.9□□□□□ -0.98
VEGFA-223ENST00000523125 A0A0J9YX75 114 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 A8MTW9 85 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 IGLL5B9A064 214 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 LYRM1O43325 122 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 METTL15P1P0C7V9 234 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 GALR1P47211 349 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 MEOX2P50222 304 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 TCTAP57738 103 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 PLP1P60201 277 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 DLK1P80370 383 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 PRR20EP86478 221 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 PRR20CP86479 221 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 PRR20DP86480 221 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 PRR20BP86481 221 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 PRR20AP86496 221 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 ARL16Q0P5N6 197 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 C12orf74Q32Q52 190 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 FAM78BQ5VT40 261 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 SPATA31B1PQ5VZV4 182 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 OR1B1Q8NGR6 318 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 NEU1Q99519 415 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 SLC35B3Q9H1N7 401 aa8.89□□□□□ -0.99
VEGFA-223ENST00000523125 SMCO3A2RU48 225 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 FNDC10F2Z333 226 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 H3BRN7 92 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 SCGB1D2O95969 90 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 MBPP02686 304 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-223ENST00000523125 TCRBP04435 133 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 IL5P05113 134 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 249.6 ms