RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ASIPP42127 132 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 MRAP2Q96G30 205 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 SLC50A1Q9BRV3 221 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 TRBV6-6A0A0A6YYG2 114 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 GAGE2BQ13066 116 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 GAGE2EQ4V326 116 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 GAGE2DQ9UEU5 116 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 EPDR1Q9UM22 224 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 TRAV41A0A0B4J266 112 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 RAMP3O60896 148 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 LEPP41159 167 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 IGF2-ASQ6U949 168 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 LINC01356Q8N9X3 169 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 GAFA1Q96PS6 74 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 CD5LO43866 347 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 SUPT4H1P63272 117 aaKnown RBP13.3□□□□□ -0.28
USP42-207ENST00000521713 OR5AN1Q8NGI8 311 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 IGKV1D-8A0A087WSZ0 117 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 MLNRO43193 412 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 IGHV2-70P01814 119 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 ADCYAP1P18509 176 aa13.3□□□□□ -0.28
USP42-207ENST00000521713 ZNF407Q9C0G0 2248 aa13.29□□□□□ -0.28
USP42-207ENST00000521713 CKS1BP61024 79 aa13.29□□□□□ -0.28
USP42-207ENST00000521713 ZNF56Q15929 161 aa13.29□□□□□ -0.28
USP42-207ENST00000521713 RNF125Q96EQ8 232 aa13.29□□□□□ -0.28
USP42-207ENST00000521713 SLX1AQ9BQ83 275 aa13.29□□□□□ -0.28
USP42-207ENST00000521713 BPESC1Q9GZL8 116 aa13.29□□□□□ -0.28
USP42-207ENST00000521713 IGHV1-3A0A0C4DH29 117 aa13.29□□□□□ -0.28
USP42-207ENST00000521713 GATA3P23771 443 aa13.29□□□□□ -0.28
USP42-207ENST00000521713 IFI27L1Q96BM0 104 aa13.29□□□□□ -0.28
USP42-207ENST00000521713 NPFFO15130 113 aa13.29□□□□□ -0.28
USP42-207ENST00000521713 IGKCP01834 107 aa13.29□□□□□ -0.28
USP42-207ENST00000521713 SLC25A48Q6ZT89 311 aaKnown RBP13.29□□□□□ -0.28
USP42-207ENST00000521713 TRAV8-4A0A0B4J246 113 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 COL8A2P25067 703 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 ASCL2Q99929 193 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 NOTCH4Q99466 2003 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 ORMDL2Q53FV1 153 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 COQ2Q96H96 371 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 CACNG7P62955 275 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 EFNB3Q15768 340 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 PCNX1Q96RV3 2341 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 IGHV3OR16-8A0A075B7F1 116 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 SRSF1Q07955 248 aaKnown RBP eCLIP13.28□□□□□ -0.28
USP42-207ENST00000521713 GAGE1Q13065 139 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 COX11Q9Y6N1 276 aa13.28□□□□□ -0.28
USP42-207ENST00000521713 C5orf63A6NC05 138 aa13.27□□□□□ -0.28
USP42-207ENST00000521713 H3BUX3 64 aa13.27□□□□□ -0.28
USP42-207ENST00000521713 LILRA1O75019 489 aa13.27□□□□□ -0.28
USP42-207ENST00000521713 ITGB1BP1O14713 200 aa13.27□□□□□ -0.29
USP42-207ENST00000521713 DUSP14O95147 198 aaKnown RBP13.27□□□□□ -0.29
USP42-207ENST00000521713 FAM74A4Q5TZK3 123 aa13.27□□□□□ -0.29
USP42-207ENST00000521713 PSMB11A5LHX3 300 aa13.27□□□□□ -0.29
USP42-207ENST00000521713 GHRHP01286 108 aa13.27□□□□□ -0.29
USP42-207ENST00000521713 PAX1P15863 534 aa13.27□□□□□ -0.29
USP42-207ENST00000521713 Q6P435 159 aa13.27□□□□□ -0.29
USP42-207ENST00000521713 PRTN3P24158 256 aa13.27□□□□□ -0.29
USP42-207ENST00000521713 RPRMLQ8N4K4 120 aa13.27□□□□□ -0.29
USP42-207ENST00000521713 IGKV1D-17A0A075B6S4 117 aa13.26□□□□□ -0.29
USP42-207ENST00000521713 FABP5P3A8MUU1 101 aa13.26□□□□□ -0.29
USP42-207ENST00000521713 PLXNA4Q9HCM2 1894 aa13.26□□□□□ -0.29
USP42-207ENST00000521713 PAX8Q06710 450 aa13.26□□□□□ -0.29
USP42-207ENST00000521713 NDUFA3O95167 84 aa13.26□□□□□ -0.29
USP42-207ENST00000521713 KLRD1Q13241 179 aa13.26□□□□□ -0.29
USP42-207ENST00000521713 C3orf79P0CE67 100 aa13.25□□□□□ -0.29
USP42-207ENST00000521713 GATA2P23769 480 aaPredicted RBP13.25□□□□□ -0.29
USP42-207ENST00000521713 SUMO2P61956 95 aaKnown RBP13.25□□□□□ -0.29
USP42-207ENST00000521713 DUX3Q96PT4 197 aa13.25□□□□□ -0.29
USP42-207ENST00000521713 EREGO14944 169 aa13.25□□□□□ -0.29
USP42-207ENST00000521713 CMC4P56277 68 aaPredicted RBP13.25□□□□□ -0.29
USP42-207ENST00000521713 TMEM167AQ8TBQ9 72 aa13.25□□□□□ -0.29
USP42-207ENST00000521713 GAGE12BA1L429 117 aa13.25□□□□□ -0.29
USP42-207ENST00000521713 ANAPC1Q9H1A4 1944 aa13.25□□□□□ -0.29
USP42-207ENST00000521713 TDGF1P13385 188 aa13.25□□□□□ -0.29
USP42-207ENST00000521713 FAM71F2Q6NXP2 309 aa13.25□□□□□ -0.29
USP42-207ENST00000521713 TMEM256Q8N2U0 113 aa13.25□□□□□ -0.29
USP42-207ENST00000521713 FHL1Q13642 323 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 C5orf64Q2M2E5 130 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 VSIRQ9H7M9 311 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 BUB1B-PAK6H3BSN5 160 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 NMSQ5H8A3 153 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 Q0VG73 95 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 C10orf91Q5T1B1 145 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 ASCL4Q6XD76 172 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 BRD3OSQ6XYD6 125 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 PAX2Q02962 417 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 Q6ZS49 121 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 KIAA1671Q9BY89 1806 aa13.24□□□□□ -0.29
USP42-207ENST00000521713 F2Z2F3 143 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 STHQ8IWL8 128 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 LINC01587Q99440 93 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 LY6HO94772 140 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 MSMBP08118 114 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 CFPP27918 469 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 GATA4P43694 442 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 MPV17L2Q567V2 206 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 TMEM219Q86XT9 240 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 OR10W1Q8NGF6 305 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 GBF1Q92538 1859 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 PLAURQ03405 335 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms