RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 HIGD1CA8MV81 97 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 C9JCJ5 164 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 ORM1P02763 201 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 OSTCQ9NRP0 149 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 CDSNQ15517 529 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 PIMREGQ9BSJ6 248 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 SSBP4Q9BWG4 385 aaPredicted RBP8.13□□□□□ -1.11
MCF2-209ENST00000520602 SLC25A2Q9BXI2 301 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 SLC25A39Q9BZJ4 359 aaPredicted RBP8.13□□□□□ -1.11
MCF2-209ENST00000520602 PPP1R14DQ9NXH3 145 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 M0R2Z0 102 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 SERF1AO75920 110 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 CD33P20138 364 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 LINC00574Q9H8X3 128 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 RABAC1Q9UI14 185 aa8.13□□□□□ -1.11
MCF2-209ENST00000520602 MUC21A0A0G2JKD1 596 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 MUC21A0A140T8X8 626 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 HSBP1L1C9JCN9 74 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 M0R1W7 72 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 HLA-DRB1P01911 266 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 PKIAP61925 76 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 MUC21Q5SSG8 566 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 BRD3OSQ6XYD6 125 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 ST6GALNAC6Q969X2 333 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 ATG101Q9BSB4 218 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 CDC42EP3Q9UKI2 254 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 BMPR1BO00238 502 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 PF4V1P10720 104 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 RPL7P18124 248 aaKnown RBP8.12□□□□□ -1.11
MCF2-209ENST00000520602 CLEC19AQ6UXS0 136 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 NUDT10Q8NFP7 164 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 NUDT11Q96G61 164 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 CLEC5AQ9NY25 188 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 NOTCH2Q04721 2471 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 NEU1Q99519 415 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 RNF5Q99942 180 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 DMRT1Q9Y5R6 373 aa8.12□□□□□ -1.11
MCF2-209ENST00000520602 USP9YO00507 2555 aaPredicted RBP8.12□□□□□ -1.11
MCF2-209ENST00000520602 PRSS46E5RG02 174 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 IGLV1-47P01700 117 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 IGLV2-23P01705 113 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 KHDC1LQ5JSQ8 128 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 ACTL10Q5JWF8 245 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 FAM19A2Q8N3H0 131 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 GRAMD2BQ96HH9 432 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 C7orf69Q9H7B7 122 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 NAGKQ9UJ70 344 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 DMDP11532 3685 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 K7EN84 100 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 GCGP01275 180 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 RHOGP84095 191 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 AARDQ4LEZ3 155 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 PRSS3P2Q8NHM4 247 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 TRAV40A0A0B4J280 105 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 GZMBP10144 247 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 SAA4P35542 130 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 PAFAH1B2P68402 229 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 ZNF329Q86UD4 541 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 C8orf31Q8N9H6 132 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 PTPN13Q12923 2485 aa8.11□□□□□ -1.11
MCF2-209ENST00000520602 C20orf202A1L168 122 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 M0R3E3 92 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 SIAH2O43255 324 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 FAM209BQ5JX69 171 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 SMIM15Q7Z3B0 74 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 CIARTQ8N365 385 aaPredicted RBP8.1□□□□□ -1.11
MCF2-209ENST00000520602 IZUMO1RA6ND01 250 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 DIRC3C9JPN6 131 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 RPL15P61313 204 aaKnown RBP8.1□□□□□ -1.11
MCF2-209ENST00000520602 TMEM249Q2WGJ8 235 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 PATE2Q6UY27 113 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 FA2HQ7L5A8 372 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 ARL2-SNX15V9GYD0 113 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 DMXL1Q9Y485 3027 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 TCRAP04437 139 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 DDTP30046 118 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 DLX6P56179 175 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 RELQ04864 619 aaPredicted RBP8.1□□□□□ -1.11
MCF2-209ENST00000520602 RIGQ13278 110 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 PVRIGQ6DKI7 326 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 OR5R1Q8NH85 324 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 RPP21Q9H633 154 aaKnown RBP8.1□□□□□ -1.11
MCF2-209ENST00000520602 OTORQ9NRC9 128 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 TRBV9A0A0B4J1U6 114 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 C15orf32Q32M92 178 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 FBXL19-AS1Q494R0 122 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 IGFL4Q6B9Z1 124 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 FMC1Q96HJ9 113 aa8.1□□□□□ -1.11
MCF2-209ENST00000520602 CCDC168Q8NDH2 2452 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 PTPRBP23467 1997 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 WDFY3Q8IZQ1 3526 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 TMEM189A5PLL7 270 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 TRGV3P03979 118 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 TMEM183BQ1AE95 376 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 ZNF562Q6V9R5 426 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 TMEM116Q8NCL8 245 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 IGHV3-11P01762 117 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 ATP5G2Q06055 141 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 ZNF841Q6ZN19 808 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 C11orf52Q96A22 123 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms