RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 PET100P0DJ07 73 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 HOXA1P49639 335 aaPredicted RBP6.25□□□□□ -1.41
TRIM35-202ENST00000519219 AKR1C2P52895 323 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 FXYD7P58549 80 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 CYCSP99999 105 aaKnown RBP6.25□□□□□ -1.41
TRIM35-202ENST00000519219 FGL1Q08830 312 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 SMCO1Q147U7 214 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 Q6ZRM9 215 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 GLMPQ8WWB7 406 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 METTL26Q96S19 204 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 TMEM222Q9H0R3 208 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 FAM212BQ9NTI7 297 aaPredicted RBP6.25□□□□□ -1.41
TRIM35-202ENST00000519219 PLA2G2EQ9NZK7 142 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 U3KQE9 123 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 FXYD6-FXYD2A0A087WZ82 144 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 DUXBA0A1W2PPF3 345 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 HELTA6NFD8 242 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 INS-IGF2F8WCM5 200 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 ADAP1O75689 374 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 NXPH3O95157 252 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 SCGB1D2O95969 90 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 IFNA17P01571 189 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 SNCAP37840 140 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 OPRK1P41145 380 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 EMP1P54849 157 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 S100A10P60903 97 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 USF2Q15853 346 aaPredicted RBP6.24□□□□□ -1.41
TRIM35-202ENST00000519219 IAH1Q2TAA2 248 aaPredicted RBP6.24□□□□□ -1.41
TRIM35-202ENST00000519219 BSXQ3C1V8 233 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 LRRC37A5PQ49AS3 106 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 GDF5OSQ5U4N7 250 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 C16orf54Q6UWD8 224 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 Q6ZR54 194 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 NOXA1Q86UR1 476 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 OR4X1Q8NH49 305 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 TMEM170AQ8WVE7 144 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 RBPMSQ93062 196 aaKnown RBP6.24□□□□□ -1.41
TRIM35-202ENST00000519219 TMEM231Q9H6L2 316 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 GSKIPQ9P0R6 139 aa6.24□□□□□ -1.41
TRIM35-202ENST00000519219 A0A1W2PS18 150 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 FAM90A26D6RGX4 464 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 H3BMM0 161 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 IGKV3-20P01619 116 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 IGLC1P0CG04 106 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 P0DMU3 169 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 FAM231AP0DMU4 169 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 FAM231CP0DMU5 169 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 UCP1P25874 307 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 NUP62P37198 522 aaPredicted RBP6.23□□□□□ -1.41
TRIM35-202ENST00000519219 RND2P52198 227 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 NKX2-5P52952 324 aaPredicted RBP6.23□□□□□ -1.41
TRIM35-202ENST00000519219 H2BFSP57053 126 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 TMEM41BQ5BJD5 291 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 GGNBP1Q5YKI7 109 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 LRTM2Q8N967 370 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 LHFPL5Q8TAF8 219 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 THAP6Q8TBB0 222 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 IL22RA2Q969J5 263 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 RRNAD1Q96FB5 475 aaKnown RBP6.23□□□□□ -1.41
TRIM35-202ENST00000519219 C2orf50Q96LR7 162 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 HYLS1Q96M11 299 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 NDUFAF3Q9BU61 184 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 NMES1Q9C002 83 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 TMED3Q9Y3Q3 217 aa6.23□□□□□ -1.41
TRIM35-202ENST00000519219 WRBO00258 174 aa6.22□□□□□ -1.41
TRIM35-202ENST00000519219 RLN2P04090 185 aa6.22□□□□□ -1.41
TRIM35-202ENST00000519219 LGALS9BQ3B8N2 356 aa6.22□□□□□ -1.41
TRIM35-202ENST00000519219 PRSS54Q6PEW0 395 aa6.22□□□□□ -1.41
TRIM35-202ENST00000519219 ZNF705AQ6ZN79 300 aaPredicted RBP6.22□□□□□ -1.41
TRIM35-202ENST00000519219 LYZL2Q7Z4W2 148 aa6.22□□□□□ -1.41
TRIM35-202ENST00000519219 SELENOHQ8IZQ5 122 aaKnown RBP6.22□□□□□ -1.41
TRIM35-202ENST00000519219 OR1S1Q8NH92 325 aa6.22□□□□□ -1.41
TRIM35-202ENST00000519219 GLYATL2Q8WU03 294 aa6.22□□□□□ -1.41
TRIM35-202ENST00000519219 TMEM56-RWDD3S4R434 201 aa6.22□□□□□ -1.41
TRIM35-202ENST00000519219 IGHV3OR16-12A0A075B7B8 117 aa6.21□□□□□ -1.42
TRIM35-202ENST00000519219 ZNF705FA8MVS1 300 aaPredicted RBP6.21□□□□□ -1.42
TRIM35-202ENST00000519219 CORTO00230 105 aa6.21□□□□□ -1.42
TRIM35-202ENST00000519219 CDS2O95674 445 aa6.21□□□□□ -1.42
TRIM35-202ENST00000519219 IL4P05112 153 aa6.21□□□□□ -1.42
TRIM35-202ENST00000519219 ZNF705DP0CH99 300 aaPredicted RBP6.21□□□□□ -1.42
TRIM35-202ENST00000519219 ZNF705BP0CI00 300 aaPredicted RBP6.21□□□□□ -1.42
TRIM35-202ENST00000519219 OR10J1P30954 320 aa6.21□□□□□ -1.42
TRIM35-202ENST00000519219 ZBTB8BQ8NAP8 495 aaPredicted RBP6.21□□□□□ -1.42
TRIM35-202ENST00000519219 PPP1R1CQ8WVI7 109 aa6.21□□□□□ -1.42
TRIM35-202ENST00000519219 LSM5Q9Y4Y9 91 aaKnown RBP6.21□□□□□ -1.42
TRIM35-202ENST00000519219 L7N2F9 121 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 ARPC5O15511 151 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 TSC22D2O75157 780 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 IFNA10P01566 189 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 HLA-DRB4P13762 266 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 HTN3P15516 51 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 PVALBP20472 110 aaPredicted RBP6.2□□□□□ -1.42
TRIM35-202ENST00000519219 SUB1P53999 127 aaKnown RBP eCLIP6.2□□□□□ -1.42
TRIM35-202ENST00000519219 VAMP2P63027 116 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 RAB32Q13637 225 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 FAM222AQ5U5X8 452 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 SIGLEC15Q6ZMC9 328 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 FAM219AQ8IW50 185 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 UBE2DNLQ8IWF7 75 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 ZNF709Q8N972 641 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms